RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 RIDAP52758 137 aaKnown RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 ZNF121P58317 390 aaPredicted RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 CXCR4P61073 352 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 SNRPGP62308 76 aaKnown RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 BTG1P62324 171 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ACTA2P62736 377 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ACTG2P63267 376 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 IL5RAQ01344 420 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ZNF92Q03936 586 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 RIPPLY1Q0D2K3 151 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 MRPL28Q13084 256 aaKnown RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 IL18R1Q13478 541 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ZNF181Q2M3W8 571 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 RSPO1Q2MKA7 263 aaPredicted RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 TMEM155Q4W5P6 130 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 GLYATL3Q5SZD4 288 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 C6orf52Q5T4I8 152 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 BCL2L15Q5TBC7 163 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 AADACL4Q5VUY2 407 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ZNF322Q6U7Q0 402 aaPredicted RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 BTNL8Q6UX41 500 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 LRRN1Q6UXK5 716 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 Q71RC1 249 aaPredicted RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 FAM220AQ7Z4H9 259 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 C5orf24Q7Z6I8 188 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 NAA40Q86UY6 237 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 LRRC28Q86X40 367 aaPredicted RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 SLC35F2Q8IXU6 374 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 OR5AS1Q8N127 324 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 OR8H2Q8N162 312 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 FGFRL1Q8N441 504 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ARL6IP6Q8N6S5 226 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 PACRGLQ8N7B6 248 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 CSNK1G2-AS1Q8NCQ2 148 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 BBS1Q8NFJ9 593 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 OR4M2Q8NGB6 313 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 OR10AD1Q8NGE0 317 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 HAVCR2Q8TDQ0 301 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 YIPF5Q969M3 257 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 TMEM186Q96B77 213 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 SGK3Q96BR1 496 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 REEP6Q96HR9 211 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 MICU1Q9BPX6 476 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ADAT1Q9BUB4 502 aaKnown RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 RTL8AQ9BWD3 113 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 OCR1Q9BZK8 76 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 VCX3BQ9H321 246 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 FNDC4Q9H6D8 234 aaPredicted RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 NARFLQ9H6Q4 476 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 MOB1AQ9H8S9 216 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 JPT2Q9H910 190 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 TMEM106BQ9NUM4 274 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 SMPD3Q9NY59 655 aaPredicted RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 TREM2Q9NZC2 230 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 DNAJC27Q9NZQ0 273 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 ZMAT5Q9UDW3 170 aaKnown RBP3.08□□□□□ -1.92
NUP88-202ENST00000570937 MIOXQ9UGB7 285 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 GMPPBQ9Y5P6 360 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 NPTNQ9Y639 398 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 NIPBLQ6KC79 2804 aaeCLIP3.08□□□□□ -1.92
NUP88-202ENST00000570937 PRR14LQ5THK1 2151 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 USF3Q68DE3 2245 aa3.08□□□□□ -1.92
NUP88-202ENST00000570937 F8P00451 2351 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 PPIAL4EA0A075B759 164 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 A0A096LNT2 108 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 TRAV38-1A0A0B4J264 116 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 PPIAL4CA0A0B4J2A2 164 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 ZNF816-ZNF321PA0A0X1KG74 233 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 A0A1B0GVI7 797 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 A0A1B0GWJ7 208 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 DAPL1A0PJW8 107 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 METTL15A6NJ78 407 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OR5B21A6NL26 309 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 TMEM210A6NLX4 147 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 DHRS7CA6NNS2 312 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 PPIAL4DF5H284 164 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 F5H5P2 479 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 J3QLI3 93 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 PNPP00491 289 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 CST4P01036 141 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 HLA-DPB1P04440 258 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 KRTAP1-4P0C5Y4 121 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OCM2P0CE71 109 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OCMP0CE72 109 aaPredicted RBP3.07□□□□□ -1.92
NUP88-202ENST00000570937 PPIAL4FP0DN26 164 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 MUC1P15941 1255 aaPredicted RBP3.07□□□□□ -1.92
NUP88-202ENST00000570937 ADRA2CP18825 462 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 SRP14P37108 136 aaKnown RBP3.07□□□□□ -1.92
NUP88-202ENST00000570937 CD200P41217 278 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 NPY4RP50391 375 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 PSMD7P51665 324 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 HCCSP53701 268 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 SRPXP78539 464 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 FAM3AP98173 230 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 RAB40BQ12829 278 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 MED21Q13503 144 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 OR8B8Q15620 311 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 TRIP10Q15642 601 aa3.07□□□□□ -1.92
NUP88-202ENST00000570937 MICBQ29980 383 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms