RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 TRAV8-7A0A075B6U6 113 aa16.4■□□□□ 0.22
LITAF-205ENST00000570904 RAB7AP51149 207 aa16.4■□□□□ 0.22
LITAF-205ENST00000570904 RPS11P62280 158 aaKnown RBP eCLIP16.4■□□□□ 0.22
LITAF-205ENST00000570904 FOXB2Q5VYV0 432 aa16.4■□□□□ 0.22
LITAF-205ENST00000570904 TTC23Q5W5X9 447 aa16.4■□□□□ 0.22
LITAF-205ENST00000570904 LINC00596Q86U02 117 aa16.4■□□□□ 0.22
LITAF-205ENST00000570904 WFDC9Q8NEX5 89 aa16.4■□□□□ 0.22
LITAF-205ENST00000570904 NEK7Q8TDX7 302 aa16.4■□□□□ 0.22
LITAF-205ENST00000570904 CCDC107Q8WV48 283 aa16.4■□□□□ 0.22
LITAF-205ENST00000570904 PGLYRP3Q96LB9 341 aa16.4■□□□□ 0.22
LITAF-205ENST00000570904 PAK1IP1Q9NWT1 392 aaPredicted RBP16.4■□□□□ 0.22
LITAF-205ENST00000570904 CHCHD3Q9NX63 227 aaKnown RBP16.4■□□□□ 0.22
LITAF-205ENST00000570904 PNMA8CA0A1B0GUJ8 204 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 HSD17B6O14756 317 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 IGKV1D-33P01593 117 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 IGKV1-33P01594 117 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 MPV17LQ2QL34 196 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 Q499Y3 187 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 FAM53AQ6NSI3 398 aaPredicted RBP16.39■□□□□ 0.21
LITAF-205ENST00000570904 SLC16A12Q6ZSM3 486 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 ZNF329Q86UD4 541 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 OR8H3Q8N146 312 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 C5orf56Q8N8D9 126 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 ZNF485Q8NCK3 441 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 SETD9Q8NE22 299 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 GGHQ92820 318 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 ARL11Q969Q4 196 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 CKLFQ9UBR5 152 aa16.39■□□□□ 0.21
LITAF-205ENST00000570904 IGHV3-43A0A0B4J1X8 118 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 A0A1W2PPK0 400 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 PSMB11A5LHX3 300 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 C15orf65H3BRN8 121 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 ZNF780AO75290 641 aaPredicted RBP16.38■□□□□ 0.21
LITAF-205ENST00000570904 IGHV3-43DP0DP04 118 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 GTF2F2P13984 249 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 REG1BP48304 166 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 ADARB1P78563 741 aaKnown RBP16.38■□□□□ 0.21
LITAF-205ENST00000570904 MED21Q13503 144 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 YIF1BQ5BJH7 314 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 DHRSXQ8N5I4 330 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 JAGN1Q8N5M9 183 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 MUL1Q969V5 352 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 NOL4LQ96MY1 436 aaPredicted RBP16.38■□□□□ 0.21
LITAF-205ENST00000570904 OR14A2Q96R54 314 aa16.38■□□□□ 0.21
LITAF-205ENST00000570904 TRBV5-7A0A0A0MS05 114 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 IGHV3-72A0A0B4J1Y9 119 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 CCRL2O00421 344 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 SDCBPO00560 298 aaPredicted RBP16.37■□□□□ 0.21
LITAF-205ENST00000570904 GPX5O75715 221 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 FSTP19883 344 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 GZMHP20718 246 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 LOXL3P58215 753 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 ZNF816Q0VGE8 651 aaPredicted RBP16.37■□□□□ 0.21
LITAF-205ENST00000570904 ST3GAL4Q11206 333 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 MOB3BQ86TA1 216 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 LINC00527Q9UJ94 153 aa16.37■□□□□ 0.21
LITAF-205ENST00000570904 MRPS28Q9Y2Q9 187 aaKnown RBP16.37■□□□□ 0.21
LITAF-205ENST00000570904 IGHV1-3A0A0C4DH29 117 aa16.36■□□□□ 0.21
LITAF-205ENST00000570904 AIPO00170 330 aa16.36■□□□□ 0.21
LITAF-205ENST00000570904 FGF16O43320 207 aa16.36■□□□□ 0.21
LITAF-205ENST00000570904 MT-ND4P03905 459 aa16.36■□□□□ 0.21
LITAF-205ENST00000570904 SLC35A2P78381 396 aa16.36■□□□□ 0.21
LITAF-205ENST00000570904 GLIPR1L1Q6UWM5 242 aa16.36■□□□□ 0.21
LITAF-205ENST00000570904 ZNF497Q6ZNH5 498 aa16.36■□□□□ 0.21
LITAF-205ENST00000570904 PACRGLQ8N7B6 248 aa16.36■□□□□ 0.21
LITAF-205ENST00000570904 GFOD1Q9NXC2 390 aa16.36■□□□□ 0.21
LITAF-205ENST00000570904 MAS1P04201 325 aa16.35■□□□□ 0.21
LITAF-205ENST00000570904 GAPDHP04406 335 aaKnown RBP16.35■□□□□ 0.21
LITAF-205ENST00000570904 GNAO1P09471 354 aa16.35■□□□□ 0.21
LITAF-205ENST00000570904 DOC2BQ14184 412 aa16.35■□□□□ 0.21
LITAF-205ENST00000570904 RCN1Q15293 331 aa16.35■□□□□ 0.21
LITAF-205ENST00000570904 LAIR2Q6ISS4 152 aa16.35■□□□□ 0.21
LITAF-205ENST00000570904 STX19Q8N4C7 294 aa16.35■□□□□ 0.21
LITAF-205ENST00000570904 LINC00311Q8N616 119 aa16.35■□□□□ 0.21
LITAF-205ENST00000570904 OR52M1Q8NGK5 317 aa16.35■□□□□ 0.21
LITAF-205ENST00000570904 RCC2Q9P258 522 aaKnown RBP16.35■□□□□ 0.21
LITAF-205ENST00000570904 EFCAB10A6NFE3 127 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 SERPINE3A8MV23 424 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 ORC5O43913 435 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 TAS2R43P59537 309 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 GPR176Q14439 515 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 AWAT2Q6E213 333 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 SLC35E3Q7Z769 313 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 CYYR1Q96J86 154 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 DERL3Q96Q80 235 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 BANF2Q9H503 90 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 SPACA1Q9HBV2 294 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 C8orf4Q9NR00 106 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 ETAA1Q9NY74 926 aa16.34■□□□□ 0.21
LITAF-205ENST00000570904 C12orf77C9JDV5 145 aa16.33■□□□□ 0.2
LITAF-205ENST00000570904 MCRIP1C9JLW8 97 aa16.33■□□□□ 0.2
LITAF-205ENST00000570904 SLC31A2O15432 143 aa16.33■□□□□ 0.2
LITAF-205ENST00000570904 MPIG6BO95866 241 aa16.33■□□□□ 0.2
LITAF-205ENST00000570904 CAPGP40121 348 aa16.33■□□□□ 0.2
LITAF-205ENST00000570904 RPL23AP62750 156 aaKnown RBP16.33■□□□□ 0.2
LITAF-205ENST00000570904 EBI3Q14213 229 aa16.33■□□□□ 0.2
LITAF-205ENST00000570904 SYT6Q5T7P8 510 aaPredicted RBP16.33■□□□□ 0.2
LITAF-205ENST00000570904 RAB12Q6IQ22 244 aa16.33■□□□□ 0.2
LITAF-205ENST00000570904 ETV3LQ6ZN32 361 aa16.33■□□□□ 0.2
LITAF-205ENST00000570904 C18orf65Q6ZTR6 163 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms