RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SPACA1Q9HBV2 294 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 GHRLQ9UBU3 117 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 PITPNC1Q9UKF7 332 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 BLOC1S6Q9UL45 172 aa10.48□□□□□ -0.73
CNOT1-220ENST00000569916 LEUTXA8MZ59 168 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 LY6LH3BQJ8 138 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 C15orf65H3BRN8 121 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 AIPO00170 330 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 TOR1AO14656 332 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 IGHV3-7P01780 117 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 VSIG8P0DPA2 414 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 CD37P11049 281 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 CEACAM3P40198 252 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 PRRX1P54821 245 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 TRAM1Q15629 374 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 LTC4SQ16873 150 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 TPTE2P1Q5T6R2 138 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 GLT8D1Q68CQ7 371 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 SIGIRRQ6IA17 410 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 RAB12Q6IQ22 244 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 OR10A7Q8NGE5 316 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 LEAP2Q969E1 77 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 CREB3L1Q96BA8 519 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 MMP28Q9H239 520 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 ZNF702PQ9H963 129 aa10.47□□□□□ -0.73
CNOT1-220ENST00000569916 TRRAPQ9Y4A5 3859 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 PKD1L1Q8TDX9 2849 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 MCRIP1C9JLW8 97 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 J3QR06 171 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 SLC22A1O15245 554 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 MPIG6BO95866 241 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 MT-ND4P03905 459 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 UBBP0CG47 229 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 GZMHP20718 246 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 PSMA1P25786 263 aaKnown RBP10.46□□□□□ -0.73
CNOT1-220ENST00000569916 GABARAPL2P60520 117 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 RBM39Q14498 530 aaKnown RBP10.46□□□□□ -0.73
CNOT1-220ENST00000569916 FBLN7Q53RD9 439 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 OR10K2Q6IF99 312 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 ZNF367Q7RTV3 350 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 GAPTQ8N292 157 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 Q8N2B8 174 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 OR2T6Q8NHC8 308 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 CCDC107Q8WV48 283 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 GFI1Q99684 422 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 CST11Q9H112 138 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 KCNK15Q9H427 330 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 ETAA1Q9NY74 926 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 PSG11Q9UQ72 335 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 PEX16Q9Y5Y5 336 aa10.46□□□□□ -0.73
CNOT1-220ENST00000569916 TET2Q6N021 2002 aaPredicted RBP10.45□□□□□ -0.74
CNOT1-220ENST00000569916 OOSP1A8MZH6 123 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 ORC5O43913 435 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 PDCD6O75340 191 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 GLAP06280 429 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 FUT3P21217 361 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 CD24P25063 80 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 HTR2CP28335 458 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 GNG10P50151 68 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 QRFPP83859 136 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 FABP5Q01469 135 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 UNC119Q13432 240 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 HABP2Q14520 560 aaPredicted RBP10.45□□□□□ -0.74
CNOT1-220ENST00000569916 SSX1Q16384 188 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 C11orf88Q6PI97 169 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 SLC16A12Q6ZSM3 486 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 OR6M1Q8NGM8 313 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 UBALD1Q8TB05 177 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 ARL11Q969Q4 196 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 ACOT13Q9NPJ3 140 aa10.45□□□□□ -0.74
CNOT1-220ENST00000569916 AMMECR1Q9Y4X0 333 aaPredicted RBP10.45□□□□□ -0.74
CNOT1-220ENST00000569916 TMEM14DPA8MWL7 114 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 C12orf77C9JDV5 145 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 TIMM23O14925 209 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 DENRO43583 198 aaKnown RBP10.44□□□□□ -0.74
CNOT1-220ENST00000569916 CA11O75493 328 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 ARL6IP5O75915 188 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 CALRP27797 417 aaKnown RBP10.44□□□□□ -0.74
CNOT1-220ENST00000569916 BRS3P32247 399 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 ARHGDIBP52566 201 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 LOXL3P58215 753 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 RPS27AP62979 156 aaKnown RBP10.44□□□□□ -0.74
CNOT1-220ENST00000569916 EMX1Q04741 257 aaPredicted RBP10.44□□□□□ -0.74
CNOT1-220ENST00000569916 SYT6Q5T7P8 510 aaPredicted RBP10.44□□□□□ -0.74
CNOT1-220ENST00000569916 FAM53AQ6NSI3 398 aaPredicted RBP10.44□□□□□ -0.74
CNOT1-220ENST00000569916 CCDC144NLQ6NUI1 221 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 TREML4Q6UXN2 200 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 KLHDC1Q8N7A1 406 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 OR52M1Q8NGK5 317 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 OR4K15Q8NH41 348 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 TOMM40LQ969M1 308 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 TMEM59Q9BXS4 323 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 SERTAD4Q9NUC0 356 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 GFOD1Q9NXC2 390 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 TRAPPC2LQ9UL33 140 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 CMYA5Q8N3K9 4069 aa10.44□□□□□ -0.74
CNOT1-220ENST00000569916 IGHV3-43A0A0B4J1X8 118 aa10.43□□□□□ -0.74
CNOT1-220ENST00000569916 A0A1W2PPE3 182 aa10.43□□□□□ -0.74
CNOT1-220ENST00000569916 A0A1W2PPI3 338 aa10.43□□□□□ -0.74
CNOT1-220ENST00000569916 UBE2QL1A1L167 161 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms