RNA–Protein interactions for RNA: ENST00000569394.5

GTF3C1-210, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-210ENST00000569394 ARL6IP5O75915 188 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 CSN2P05814 226 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 ARSBP15848 533 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 RCC1P18754 421 aaPredicted RBP7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 HTR1DP28221 377 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 GABRA5P31644 462 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 VEGFCP49767 419 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 MXD1Q05195 221 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 UNC119Q13432 240 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 DIAPH2-AS1Q14236 149 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 HABP2Q14520 560 aaPredicted RBP7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 TRAM1Q15629 374 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 RAB11BQ15907 218 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 MPV17LQ2QL34 196 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 ZNF626Q68DY1 528 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 SIGIRRQ6IA17 410 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 SLC35E4Q6ICL7 350 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 OR52W1Q6IF63 320 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 HEPN1Q6WQI6 88 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 Q6ZSV7 163 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 LYPD6Q86Y78 171 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 C11orf44Q8N8P7 122 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 Q8NFD4 153 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 OR11H6Q8NGC7 330 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 OR4P4Q8NGL7 312 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 OR1L1Q8NH94 360 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 PHYHIPQ92561 330 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 THRSPQ92748 146 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 CORO2AQ92828 525 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 KIRREL1Q96J84 757 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 EAF1Q96JC9 268 aaPredicted RBP7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 Q96M66 194 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 NEDD4LQ96PU5 975 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 SULT4A1Q9BR01 284 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 UQCC2Q9BRT2 126 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 TMEM59Q9BXS4 323 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 CST11Q9H112 138 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 OR51E2Q9H255 320 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 RNF167Q9H6Y7 350 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 CHMP1AQ9HD42 196 aaPredicted RBP7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 ISYNA1Q9NPH2 558 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 TAS2R3Q9NYW6 316 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 LRRC42Q9Y546 428 aa7.29□□□□□ -1.24
GTF3C1-210ENST00000569394 A0A0A6YYD4 124 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 LOC100506127A0A0U1RQW1 187 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 CCRL2O00421 344 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 SOCS1O15524 211 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 IL1AP01583 271 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 MT-ND4P03905 459 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 SLC2A2P11168 524 aaPredicted RBP7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 FUT3P21217 361 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 MYL9P24844 172 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 PSMA1P25786 263 aaKnown RBP7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 BLVRBP30043 206 aaPredicted RBP7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 REG1BP48304 166 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 PRRX1P54821 245 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 RPS27AP62979 156 aaKnown RBP7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 HNF4GQ14541 408 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 C2orf76Q3KRA6 126 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 FBLN7Q53RD9 439 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 C1orf100Q5SVJ3 147 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 ZNF773Q6PK81 442 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 CCBE1Q6UXH8 406 aaPredicted RBP7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 ZNF497Q6ZNH5 498 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 GDPGP1Q6ZNW5 385 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 LINC00596Q86U02 117 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 CDH26Q8IXH8 852 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 TMEM86BQ8N661 226 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 OR6M1Q8NGM8 313 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 OR10X1Q8NGY0 326 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 OR4F5Q8NH21 305 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 CAPSLQ8WWF8 208 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 MALSU1Q96EH3 234 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 CHCHD6Q9BRQ6 235 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 HDHD3Q9BSH5 251 aaPredicted RBP7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 MEGF9Q9H1U4 602 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 BEX1Q9HBH7 125 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 NDUFB11Q9NX14 153 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 PSG11Q9UQ72 335 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 TBL2Q9Y4P3 447 aaKnown RBP7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 RNF114Q9Y508 228 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 V9GY05 133 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 NBEAL1Q6ZS30 2694 aa7.28□□□□□ -1.24
GTF3C1-210ENST00000569394 IGHV3-72A0A0B4J1Y9 119 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 TMEM272A0A1B0GTI8 110 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 FAM90A8PA6NJQ4 464 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 LEUTXA8MZ59 168 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 C12orf77C9JDV5 145 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 BUB1B-PAK6H3BSN5 160 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 J3QR06 171 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 SLC17A2O00624 439 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 SLC22A1O15245 554 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 SLC31A2O15432 143 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 PDCD6O75340 191 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 BPNT1O95861 308 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 RBP4P02753 201 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 UBBP0CG47 229 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 KCNJ3P48549 501 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 KRTAP10-3P60369 221 aa7.27□□□□□ -1.25
GTF3C1-210ENST00000569394 HES1Q14469 280 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms