RNA–Protein interactions for RNA: ENST00000569050.1

PKM-223, Transcript of pyruvate kinase M1/2, human

TSL 4

Gene PKM, Length 457 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-223	ENST00000569050	SLC33A1	O00400	549 aa	Predicted RBP	12.99	□□□□□ -0.33
PKM-223	ENST00000569050	CASQ2	O14958	399 aa	Predicted RBP	12.99	□□□□□ -0.33
PKM-223	ENST00000569050	HSPA12A	O43301	675 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	SLC25A17	O43808	307 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	IL1A	P01583	271 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	ZNF44	P15621	663 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	ARSB	P15848	533 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	CNTFR	P26992	372 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	SCN1B	Q07699	218 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050		Q6P435	159 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	SATL1	Q86VE3	508 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	TMEM104	Q8NE00	496 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	LINC00574	Q9H8X3	128 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	H2AFY2	Q9P0M6	372 aa	Predicted RBP	12.99	□□□□□ -0.33
PKM-223	ENST00000569050	SNX5	Q9Y5X3	404 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	WSB1	Q9Y6I7	421 aa		12.99	□□□□□ -0.33
PKM-223	ENST00000569050	IGKV1-12	A0A0C4DH73	117 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	ZNF736	B4DX44	427 aa	Predicted RBP	12.98	□□□□□ -0.33
PKM-223	ENST00000569050	APOL3	O95236	402 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	CYB5A	P00167	134 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	IGKV1D-12	P01611	117 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	IGLV1-40	P01703	118 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	GAPDH	P04406	335 aa	Known RBP	12.98	□□□□□ -0.33
PKM-223	ENST00000569050	KIR3DL2	P43630	455 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	RBP2	P50120	134 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	F2RL1	P55085	397 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	NXNL2	Q5VZ03	156 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	ZNF322	Q6U7Q0	402 aa	Predicted RBP	12.98	□□□□□ -0.33
PKM-223	ENST00000569050	GID4	Q8IVV7	300 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	ZNF555	Q8NEP9	628 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	CNN2	Q99439	309 aa	Known RBP	12.98	□□□□□ -0.33
PKM-223	ENST00000569050	TPSG1	Q9NRR2	321 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	FAM118A	Q9NWS6	357 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	TMEM14A	Q9Y6G1	99 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	TNC	P24821	2201 aa		12.98	□□□□□ -0.33
PKM-223	ENST00000569050	IGHV4OR15-8	A0A075B7B6	117 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050		A0A087WW49	117 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	IGKV1-9	A0A0C4DH69	117 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	LOC100130705	A0A1B0GUX0	176 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	NPIPB11	E5RHQ5	1161 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	SYT7	O43581	403 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	MOS	P00540	346 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	RAB9A	P51151	201 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	ATP1B3	P54709	279 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	PITPNA	Q00169	270 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	AADACL4	Q5VUY2	407 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	PACRGL	Q8N7B6	248 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	OR8J1	Q8NGP2	316 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	RFESD	Q8TAC1	157 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	NRG4	Q8WWG1	115 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	OR4C12	Q96R67	309 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	MNT	Q99583	582 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	TOLLIP	Q9H0E2	274 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	VCX	Q9H320	206 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	MRM2	Q9UI43	246 aa	Known RBP	12.97	□□□□□ -0.33
PKM-223	ENST00000569050	ZNF107	Q9UII5	783 aa	Predicted RBP	12.97	□□□□□ -0.33
PKM-223	ENST00000569050	KIF25	Q9UIL4	384 aa		12.97	□□□□□ -0.33
PKM-223	ENST00000569050	RRP15	Q9Y3B9	282 aa	Known RBP	12.97	□□□□□ -0.33
PKM-223	ENST00000569050	C12orf77	C9JDV5	145 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	ATP6V1G2	O95670	118 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	IGLV1-51	P01701	117 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	HTR1F	P30939	366 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	CXCR4	P61073	352 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	PDZK1IP1	Q13113	114 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	DNAAF1	Q8NEP3	725 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	OR51T1	Q8NGJ9	327 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	RFT1	Q96AA3	541 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	RDH12	Q96NR8	316 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	TBX5	Q99593	518 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	CHCHD6	Q9BRQ6	235 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	HIPK2	Q9H2X6	1198 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	C8orf4	Q9NR00	106 aa		12.96	□□□□□ -0.33
PKM-223	ENST00000569050	CHCHD3	Q9NX63	227 aa	Known RBP	12.96	□□□□□ -0.33
PKM-223	ENST00000569050	ABCA13	Q86UQ4	5058 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	MEIKIN	A0A087WXM9	373 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	FAM90A10P	A6NDY2	464 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	HSPB6	O14558	160 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	ATP6V0E1	O15342	81 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	KDM4B	O94953	1096 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	SLC2A2	P11168	524 aa	Predicted RBP	12.95	□□□□□ -0.34
PKM-223	ENST00000569050	CD1B	P29016	333 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	SSTR5	P35346	364 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	MTCP1	P56278	107 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	EFNB1	P98172	346 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	ZNF565	Q8N9K5	539 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	CHST4	Q8NCG5	386 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	OR8H1	Q8NGG4	311 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	ADI1	Q9BV57	179 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	ADGRL4	Q9HBW9	690 aa		12.95	□□□□□ -0.34
PKM-223	ENST00000569050	RPP14	O95059	124 aa	Known RBP	12.94	□□□□□ -0.34
PKM-223	ENST00000569050	SERPINA3	P01011	423 aa		12.94	□□□□□ -0.34
PKM-223	ENST00000569050	AQP4	P55087	323 aa		12.94	□□□□□ -0.34
PKM-223	ENST00000569050	SLC16A12	Q6ZSM3	486 aa		12.94	□□□□□ -0.34
PKM-223	ENST00000569050	SLC35F2	Q8IXU6	374 aa		12.94	□□□□□ -0.34
PKM-223	ENST00000569050	MRGPRD	Q8TDS7	321 aa		12.94	□□□□□ -0.34
PKM-223	ENST00000569050	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	12.94	□□□□□ -0.34
PKM-223	ENST00000569050	STUB1	Q9UNE7	303 aa		12.94	□□□□□ -0.34
PKM-223	ENST00000569050	VPS13D	Q5THJ4	4388 aa		12.94	□□□□□ -0.34
PKM-223	ENST00000569050	DEGS1	O15121	323 aa		12.93	□□□□□ -0.34
PKM-223	ENST00000569050	SLC16A6	O15403	523 aa		12.93	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms