RNA–Protein interactions for RNA: ENST00000569036.2

CDH3-208, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-208ENST00000569036 MCRIP1C9JLW8 97 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 LDLRAD4O15165 306 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 KHDRBS3O75525 346 aaKnown RBP8.89□□□□□ -0.99
CDH3-208ENST00000569036 HIST1H2ABP04908 130 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 HCKP08631 526 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 DBHP09172 617 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 ASAH2BP0C7U1 165 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 MSR1P21757 451 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 SLC2A5P22732 501 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 CEBPDP49716 269 aaPredicted RBP8.89□□□□□ -0.99
CDH3-208ENST00000569036 DAP3P51398 398 aaKnown RBP8.89□□□□□ -0.99
CDH3-208ENST00000569036 FGL1Q08830 312 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 SCRN3Q0VDG4 424 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 OR8G1Q15617 311 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 LRRC10Q5BKY1 277 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 ZNF613Q6PF04 617 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 HIST3H2AQ7L7L0 130 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 TMEM17Q86X19 198 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 CDH26Q8IXH8 852 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 KLHL30-AS1Q8NEE0 82 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 DNAAF1Q8NEP3 725 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 HIST1H2ACQ93077 130 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 ALX4Q9H161 411 aaPredicted RBP8.89□□□□□ -0.99
CDH3-208ENST00000569036 TMEM27Q9HBJ8 222 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 HRASLSQ9HDD0 168 aa8.89□□□□□ -0.99
CDH3-208ENST00000569036 ZNF107Q9UII5 783 aaPredicted RBP8.89□□□□□ -0.99
CDH3-208ENST00000569036 OR6C6A6NF89 314 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 FAM90A8PA6NJQ4 464 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 CPSF4LA6NMK7 179 aaKnown RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 TEX46H3BTG2 121 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 APOL3O95236 402 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 LPLP06858 475 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 SNRNP70P08621 437 aaKnown RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 CD3GP09693 182 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 MUC1P15941 1255 aaPredicted RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 ATF1P18846 271 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 AMY2BP19961 511 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 SLC6A6P31641 620 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 LGALS4P56470 323 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 PSMA6P60900 246 aaKnown RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 RPL18Q07020 188 aaKnown RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 RBMS2Q15434 407 aaKnown RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 PCK2Q16822 640 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 MICBQ29980 383 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 PLBD1Q6P4A8 553 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 PGAP1Q75T13 922 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 SHFQ7M4L6 423 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 MKXQ8IYA7 352 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 PLPP7Q8NBV4 271 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 CLRN3Q8NCR9 226 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 OR10H4Q8NGA5 316 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 OR6M1Q8NGM8 313 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 OR5M8Q8NGP6 311 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 MOSPD2Q8NHP6 518 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 IL17DQ8TAD2 202 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 ZNF671Q8TAW3 534 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 THEM6Q8WUY1 208 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 APOBEC3DQ96AK3 386 aaPredicted RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 S100A16Q96FQ6 103 aaKnown RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 RAX2Q96IS3 184 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 MNTQ99583 582 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 TEAD3Q99594 435 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 WFDC6Q9BQY6 131 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 ADAT1Q9BUB4 502 aaKnown RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 HCAR1Q9BXC0 346 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 ISG20L2Q9H9L3 353 aaKnown RBP8.88□□□□□ -0.99
CDH3-208ENST00000569036 ADGRL4Q9HBW9 690 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 BRD7Q9NPI1 651 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 IFT46Q9NQC8 304 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 PCDHB16Q9NRJ7 776 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 PIPOXQ9P0Z9 390 aa8.88□□□□□ -0.99
CDH3-208ENST00000569036 A0A0D9SG52 128 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 A6NLC8 198 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 BLOC1S5-TXNDC5H3BN57 136 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 TSPAN4O14817 238 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 GLCEO94923 617 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 H2AFB1P0C5Y9 115 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 MED14OSP0DP75 135 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 NR2C1P13056 603 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 CA6P23280 308 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 GUCA1AP43080 201 aaPredicted RBP8.87□□□□□ -0.99
CDH3-208ENST00000569036 GPR4P46093 362 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 ZNF85Q03923 595 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 ZNF345Q14585 488 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 GSG1LQ6UXU4 331 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 LINC00114Q6XXX2 140 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 OSR2Q8N2R0 312 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 BBS1Q8NFJ9 593 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 SLC26A10Q8NG04 563 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 CCDC107Q8WV48 283 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 TMEM239Q8WW34 195 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 GHSRQ92847 366 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 C4orf36Q96KX1 117 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 CNN2Q99439 309 aaKnown RBP8.87□□□□□ -0.99
CDH3-208ENST00000569036 ATPIF1Q9UII2 106 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 MED31Q9Y3C7 131 aa8.87□□□□□ -0.99
CDH3-208ENST00000569036 SIRT4Q9Y6E7 314 aaPredicted RBP8.87□□□□□ -0.99
CDH3-208ENST00000569036 IGLV1-36A0A0B4J1U3 117 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 IFITM5A6NNB3 132 aa8.86□□□□□ -0.99
CDH3-208ENST00000569036 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms