RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 SYNGR2O43760 224 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 PGLYRP1O75594 196 aaPredicted RBP6.55□□□□□ -1.36
ATXN3-250ENST00000568290 IGKV1D-12P01611 117 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 OPN1MWP04001 364 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 OPN1MW2P0DN77 364 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 OPN1MW3P0DN78 364 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 CCNOP22674 350 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 NPBWR2P48146 333 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 NOVA1P51513 510 aaKnown RBP6.55□□□□□ -1.36
ATXN3-250ENST00000568290 GPM6AP51674 278 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 AKIRIN2Q53H80 203 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 TRIM61Q5EBN2 209 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 NMSQ5H8A3 153 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 PPP1R32Q7Z5V6 425 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 ZNF429Q86V71 674 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 C1orf87Q8N0U7 546 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 GAPTQ8N292 157 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 ZNF709Q8N972 641 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 WDR31Q8NA23 367 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 TMEM178AQ8NBL3 297 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 OR2M7Q8NG81 312 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 OR52M1Q8NGK5 317 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 PPP1R35Q8TAP8 253 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 THOC3Q96J01 351 aaKnown RBP6.55□□□□□ -1.36
ATXN3-250ENST00000568290 LOXL4Q96JB6 756 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 TP53RKQ96S44 253 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 OR51M1Q9H341 326 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 CDH20Q9HBT6 801 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 MANBALQ9NQG1 85 aa6.55□□□□□ -1.36
ATXN3-250ENST00000568290 CISD1Q9NZ45 108 aaKnown RBP6.55□□□□□ -1.36
ATXN3-250ENST00000568290 FAM24AA6NFZ4 105 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 LRRC3CA6NJW4 275 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 CCDC85CA6NKD9 419 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 H3BQ15 152 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 KCNAB3O43448 404 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 CHST1O43916 411 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 BCL3P20749 454 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 ITGA3P26006 1051 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 MPLP40238 635 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 DYNLT3P51808 116 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 UBE2NP61088 152 aaKnown RBP6.54□□□□□ -1.36
ATXN3-250ENST00000568290 SNRPEP62304 92 aaKnown RBP6.54□□□□□ -1.36
ATXN3-250ENST00000568290 POLR2GP62487 172 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATXN3-250ENST00000568290 CTAG1AP78358 180 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 NKX6-1P78426 367 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-250ENST00000568290 SRSF3P84103 164 aaKnown RBP6.54□□□□□ -1.36
ATXN3-250ENST00000568290 NHLH2Q02577 135 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 SLC10A1Q14973 349 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 SSX2Q16385 188 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 TSPO2Q5TGU0 170 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 ZNF880Q6PDB4 577 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 RNF144BQ7Z419 303 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 ZFP62Q8NB50 900 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-250ENST00000568290 CT55Q8WUE5 264 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 MBD3L1Q8WWY6 194 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 OR5P3Q8WZ94 311 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 RAB39BQ96DA2 213 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 OR5B12Q96R08 314 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 TAAR6Q96RI8 345 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 MAGT1Q9H0U3 335 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 ZNF703Q9H7S9 590 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-250ENST00000568290 CALHM2Q9HA72 323 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 PSENENQ9NZ42 101 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 PRR13Q9NZ81 148 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 TAAR3PQ9P1P4 343 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 VAX2Q9UIW0 290 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 TRAPPC2LQ9UL33 140 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 PUS1Q9Y606 427 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATXN3-250ENST00000568290 CEP192Q8TEP8 1941 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 MYO9BQ13459 2157 aa6.54□□□□□ -1.36
ATXN3-250ENST00000568290 TMEM30CPA0ZSE6 113 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 G3V3Y1 287 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 TMEM250H0YL14 139 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 HSD17B6O14756 317 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 PPP1R2P9O14990 202 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 TXNL1O43396 289 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 SS18L1O75177 396 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-250ENST00000568290 CYB5R3P00387 301 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-250ENST00000568290 HLA-HP01893 362 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 SRP19P09132 144 aaKnown RBP6.53□□□□□ -1.36
ATXN3-250ENST00000568290 OR13C7P0DN81 318 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 CCL4P13236 92 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 EDN3P14138 238 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 LMO1P25800 156 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 CD82P27701 267 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 RPS10P46783 165 aaKnown RBP6.53□□□□□ -1.36
ATXN3-250ENST00000568290 GLIPR1P48060 266 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 PSMB3P49720 205 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 LHX2P50458 406 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 FABP9Q0Z7S8 132 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 KIAA0141Q14154 515 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-250ENST00000568290 HABP2Q14520 560 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-250ENST00000568290 TMEM41BQ5BJD5 291 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 FBXW9Q5XUX1 488 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 ADAM5Q6NVV9 412 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 INO80CQ6PI98 192 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-250ENST00000568290 ZNF818PQ6ZRF7 136 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 ZNF610Q8N9Z0 462 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 GALMQ96C23 342 aa6.53□□□□□ -1.36
ATXN3-250ENST00000568290 POM121L2Q96KW2 1035 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms