RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 ATG2AQ2TAZ0 1938 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 A0A1B0GU03 582 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 CDS2O95674 445 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 TK1P04183 234 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 C16orf82Q7Z2V1 217 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 GATAD1Q8WUU5 269 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SMIM7Q9BQ49 75 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 PCGF1Q9BSM1 259 aa17.61■□□□□ 0.41
MAP1LC3B-206ENST00000564844 USF3Q68DE3 2245 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 OR4A8P0C604 315 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 NR2C1P13056 603 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 TAS2R30P59541 319 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZFP36L1Q07352 338 aaKnown RBP17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ARL16Q0P5N6 197 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SLC23A3Q6PIS1 610 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ATP5SQ99766 215 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 C11orf1Q9H5F2 150 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 CBLN4Q9NTU7 201 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 LOC400499M0QZD8 3231 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ARGFXA6NJG6 315 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 LMO7DNF2Z398 122 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 HS3ST1O14792 307 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 GZMHP20718 246 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SUMO3P55854 103 aaPredicted RBP17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 CNN3Q15417 329 aaKnown RBP17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SCGB1C1Q8TD33 95 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZNF488Q96MN9 340 aa17.6■□□□□ 0.41
MAP1LC3B-206ENST00000564844 IGHV1OR15-9A0A0B4J2B8 117 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZNF732B4DXR9 585 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 BCL2P10415 239 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 PMS2P11Q13670 270 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 Q6ZRM9 215 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 OR10A7Q8NGE5 316 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 TAAR3PQ9P1P4 343 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 FUT9Q9Y231 359 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 RPL36A-HNRNPH2H7BZ11 118 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 CYB5R3P00387 301 aaPredicted RBP17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 PI4KAP42356 2102 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 OR8G2PQ6IF36 304 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 RBMXL1Q96E39 390 aaKnown RBP17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 OR51B6Q9H340 312 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 Q9N2K0 584 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 CRIM1Q9NZV1 1036 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 DOCK10Q96BY6 2186 aa17.59■□□□□ 0.41
MAP1LC3B-206ENST00000564844 GPR179Q6PRD1 2367 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SLC22A20A6NK97 555 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 A8MWP6 167 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 CA11O75493 328 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 ZFAND5O76080 213 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 BCL3P20749 454 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 HERPUD1Q15011 391 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 KCNMB1Q16558 191 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 MRPL41Q8IXM3 137 aaKnown RBP17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 RDH5Q92781 318 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SPSB1Q96BD6 273 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SPIN2AQ99865 258 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SPIN2BQ9BPZ2 258 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 SMDT1Q9H4I9 107 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 GPR27Q9NS67 375 aa17.58■□□□□ 0.41
MAP1LC3B-206ENST00000564844 PSG2P11465 335 aa17.58■□□□□ 0.4
MAP1LC3B-206ENST00000564844 HNRNPKP61978 463 aaKnown RBP eCLIP17.58■□□□□ 0.4
MAP1LC3B-206ENST00000564844 EXT1Q16394 746 aa17.58■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PLPPR1Q8TBJ4 325 aa17.58■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SDF2L1Q9HCN8 221 aa17.58■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PITPNC1Q9UKF7 332 aa17.58■□□□□ 0.4
MAP1LC3B-206ENST00000564844 ZFHX4Q86UP3 3567 aa17.58■□□□□ 0.4
MAP1LC3B-206ENST00000564844 EGR1P18146 543 aa17.58■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SPANXN5Q5MJ07 72 aa17.58■□□□□ 0.4
MAP1LC3B-206ENST00000564844 HBE1P02100 147 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CTSSP25774 331 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 RBM11P57052 281 aaKnown RBP17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 MAML2Q8IZL2 1156 aaPredicted RBP17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 GPR146Q96CH1 333 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SCRG1O75711 98 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 FGF7P21781 194 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 GNB2P62879 340 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 ID3Q02535 119 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 OR5L2Q8NGL0 311 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 OR1P1Q8NH06 330 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 OR1F12Q8NHA8 337 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SPACA9Q96E40 222 aaPredicted RBP17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 RCC1LQ96I51 464 aaKnown RBP17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SGCZQ96LD1 299 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 DDA1Q9BW61 102 aa17.57■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CCL3P10147 92 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 VDAC1P21796 283 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 GPM6AP51674 278 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 JOSD1Q15040 202 aaPredicted RBP17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 YRDCQ86U90 279 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SRXN1Q9BYN0 137 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 CACNG5Q9UF02 275 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 RBM7Q9Y580 266 aaKnown RBP17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 A0A0J9YW62 118 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 IL18BPO95998 194 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PCP4P48539 62 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 FAM3BP58499 235 aaPredicted RBP17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 NCR3LG1Q68D85 454 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 ZDHHC23Q8IYP9 409 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 SLC25A22Q9H936 323 aa17.56■□□□□ 0.4
MAP1LC3B-206ENST00000564844 PPP1R3CQ9UQK1 317 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms