RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CDRT1O95170 752 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 BAG2O95816 211 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 PRB2P02812 416 aaPredicted RBP9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 TMEM11P17152 192 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 IGFBP3P17936 291 aaPredicted RBP9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 SLC35B1P78383 322 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 RIPK1Q13546 671 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 HES1Q14469 280 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 TMEM30BQ3MIR4 351 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 Q499Y3 187 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 DMKNQ6E0U4 476 aaPredicted RBP9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 STX19Q8N4C7 294 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 PACRGLQ8N7B6 248 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 C5orf56Q8N8D9 126 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 OR10K1Q8NGX5 313 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 OR56B4Q8NH76 319 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 RFESDQ8TAC1 157 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 PLPPR1Q8TBJ4 325 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 GHSRQ92847 366 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 TMEM80Q96HE8 168 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 GON7Q9BXV9 100 aa9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 AURKAIP1Q9NWT8 199 aaPredicted RBP9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 ZMAT5Q9UDW3 170 aaKnown RBP9.67□□□□□ -0.86
GTF3C1-204ENST00000564664 FAM90A10PA6NDY2 464 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 FAM90A7PA6NKC0 464 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 FAM90A23PA8MXZ1 464 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 GEMIN2O14893 280 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 IGHG2P01859 326 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 MT-ND4P03905 459 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 CD1AP06126 327 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 GLAP06280 429 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 IGLL1P15814 213 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 IL3RAP26951 378 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 TAS2R43P59537 309 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 SMN1Q16637 294 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 UTF1Q5T230 341 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 OR2G6Q5TZ20 316 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 STEAP3Q658P3 488 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 ZNF497Q6ZNH5 498 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 FOXRED2Q8IWF2 684 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 THRSPQ92748 146 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 LEAP2Q969E1 77 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 ARL11Q969Q4 196 aa9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 MCRIP2Q9BUT9 160 aaKnown RBP9.66□□□□□ -0.86
GTF3C1-204ENST00000564664 SERPINE3A8MV23 424 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 MCRIP1C9JLW8 97 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 C15orf65H3BRN8 121 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 HSD17B6O14756 317 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 CA11O75493 328 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 IGKV1D-33P01593 117 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 IGKV1-33P01594 117 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 FSTP19883 344 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 SERPINA2P20848 420 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 CD1BP29016 333 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 SSTR5P35346 364 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 LTC4SQ16873 150 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 ATAD3CQ5T2N8 411 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 XAF1Q6GPH4 301 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 TRAT1Q6PIZ9 186 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 TGIF2LXQ8IUE1 241 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 IZUMO1Q8IYV9 350 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 DHRSXQ8N5I4 330 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 OR8H1Q8NGG4 311 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 OR2T10Q8NGZ9 312 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 ZNF184Q99676 751 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 GFOD1Q9NXC2 390 aa9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 SIRT4Q9Y6E7 314 aaPredicted RBP9.65□□□□□ -0.86
GTF3C1-204ENST00000564664 TRBV5-7A0A0A0MS05 114 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 IGHV1-3A0A0C4DH29 117 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 EFCAB10A6NFE3 127 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 SH2D7A6NKC9 451 aaPredicted RBP9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 SDCBPO00560 298 aaPredicted RBP9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 SPINT2O43291 252 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 TXNL1O43396 289 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 IGHV3-7P01780 117 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 MYCNOSP40205 109 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 GNG10P50151 68 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 RPS11P62280 158 aaKnown RBP eCLIP9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 RPL23AP62750 156 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 EGFEM1PQ0D2K5 195 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 HNF4GQ14541 408 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 SLC22A6Q4U2R8 563 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 KHDC1LQ5JSQ8 128 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 C6orf183Q5T699 404 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 TEX38Q6PEX7 206 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 SLC35E3Q7Z769 313 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 MOB3BQ86TA1 216 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 ZNF554Q86TJ5 538 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 ZNF485Q8NCK3 441 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 DPF1Q92782 380 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 ST6GALNAC6Q969X2 333 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 EAF1Q96JC9 268 aaPredicted RBP9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 CNOT2Q9NZN8 540 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 RCC2Q9P258 522 aaKnown RBP9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 GHRLQ9UBU3 117 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 CLEC2DQ9UHP7 191 aa9.64□□□□□ -0.87
GTF3C1-204ENST00000564664 NCBP2LA6PVI3 153 aaKnown RBP9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 H0YHG0 523 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 AIPO00170 330 aa9.63□□□□□ -0.87
GTF3C1-204ENST00000564664 AP4M1O00189 453 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms