RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 GAPTQ8N292 157 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 ZNF709Q8N972 641 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 WDR31Q8NA23 367 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 TMEM178AQ8NBL3 297 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 OR2M7Q8NG81 312 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 OR52M1Q8NGK5 317 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 PPP1R35Q8TAP8 253 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 THOC3Q96J01 351 aaKnown RBP6.55□□□□□ -1.36
ATXN3-249ENST00000564606 LOXL4Q96JB6 756 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 TP53RKQ96S44 253 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 OR51M1Q9H341 326 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 CDH20Q9HBT6 801 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 MANBALQ9NQG1 85 aa6.55□□□□□ -1.36
ATXN3-249ENST00000564606 CISD1Q9NZ45 108 aaKnown RBP6.55□□□□□ -1.36
ATXN3-249ENST00000564606 FAM24AA6NFZ4 105 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 LRRC3CA6NJW4 275 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 CCDC85CA6NKD9 419 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 H3BQ15 152 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 KCNAB3O43448 404 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 CHST1O43916 411 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 BCL3P20749 454 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 ITGA3P26006 1051 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 MPLP40238 635 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 DYNLT3P51808 116 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 UBE2NP61088 152 aaKnown RBP6.54□□□□□ -1.36
ATXN3-249ENST00000564606 SNRPEP62304 92 aaKnown RBP6.54□□□□□ -1.36
ATXN3-249ENST00000564606 POLR2GP62487 172 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATXN3-249ENST00000564606 CTAG1AP78358 180 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 NKX6-1P78426 367 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-249ENST00000564606 SRSF3P84103 164 aaKnown RBP6.54□□□□□ -1.36
ATXN3-249ENST00000564606 NHLH2Q02577 135 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 SLC10A1Q14973 349 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 SSX2Q16385 188 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 TSPO2Q5TGU0 170 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 ZNF880Q6PDB4 577 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 RNF144BQ7Z419 303 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 ZFP62Q8NB50 900 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-249ENST00000564606 CT55Q8WUE5 264 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 MBD3L1Q8WWY6 194 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 OR5P3Q8WZ94 311 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 RAB39BQ96DA2 213 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 OR5B12Q96R08 314 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 TAAR6Q96RI8 345 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 MAGT1Q9H0U3 335 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 ZNF703Q9H7S9 590 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-249ENST00000564606 CALHM2Q9HA72 323 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 PSENENQ9NZ42 101 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 PRR13Q9NZ81 148 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 TAAR3PQ9P1P4 343 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 VAX2Q9UIW0 290 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 TRAPPC2LQ9UL33 140 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 PUS1Q9Y606 427 aaKnown RBP eCLIP6.54□□□□□ -1.36
ATXN3-249ENST00000564606 CEP192Q8TEP8 1941 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 MYO9BQ13459 2157 aa6.54□□□□□ -1.36
ATXN3-249ENST00000564606 TMEM30CPA0ZSE6 113 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 G3V3Y1 287 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 TMEM250H0YL14 139 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 HSD17B6O14756 317 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 PPP1R2P9O14990 202 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 TXNL1O43396 289 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 SS18L1O75177 396 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-249ENST00000564606 CYB5R3P00387 301 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-249ENST00000564606 HLA-HP01893 362 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 SRP19P09132 144 aaKnown RBP6.53□□□□□ -1.36
ATXN3-249ENST00000564606 OR13C7P0DN81 318 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 CCL4P13236 92 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 EDN3P14138 238 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 LMO1P25800 156 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 CD82P27701 267 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 RPS10P46783 165 aaKnown RBP6.53□□□□□ -1.36
ATXN3-249ENST00000564606 GLIPR1P48060 266 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 PSMB3P49720 205 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 LHX2P50458 406 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 FABP9Q0Z7S8 132 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 KIAA0141Q14154 515 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-249ENST00000564606 HABP2Q14520 560 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-249ENST00000564606 TMEM41BQ5BJD5 291 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 FBXW9Q5XUX1 488 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 ADAM5Q6NVV9 412 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 INO80CQ6PI98 192 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-249ENST00000564606 ZNF818PQ6ZRF7 136 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 ZNF610Q8N9Z0 462 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 EDARADDQ8WWZ3 215 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 GALMQ96C23 342 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 POM121L2Q96KW2 1035 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 PFDN5Q99471 154 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 TOLLIPQ9H0E2 274 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 C11orf1Q9H5F2 150 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 OBP2BQ9NPH6 170 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 TMEM9BQ9NQ34 198 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 SLC39A9Q9NUM3 307 aa6.53□□□□□ -1.36
ATXN3-249ENST00000564606 GAR1Q9NY12 217 aaKnown RBP6.53□□□□□ -1.36
ATXN3-249ENST00000564606 IGSF23A1L1A6 192 aa6.52□□□□□ -1.37
ATXN3-249ENST00000564606 SMCO3A2RU48 225 aa6.52□□□□□ -1.37
ATXN3-249ENST00000564606 OOEPA6NGQ2 149 aa6.52□□□□□ -1.37
ATXN3-249ENST00000564606 FAM90A9PA6NNJ1 464 aa6.52□□□□□ -1.37
ATXN3-249ENST00000564606 IFNL4K9M1U5 179 aa6.52□□□□□ -1.37
ATXN3-249ENST00000564606 CYB5BO43169 146 aa6.52□□□□□ -1.37
ATXN3-249ENST00000564606 GATCO43716 136 aaKnown RBP6.52□□□□□ -1.37
ATXN3-249ENST00000564606 MPDU1O75352 247 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms