RNA–Protein interactions for RNA: ENST00000564468.5

CLK3-216, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-216ENST00000564468 AMMECR1Q9Y4X0 333 aaPredicted RBP10.83□□□□□ -0.68
CLK3-216ENST00000564468 LRRC42Q9Y546 428 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 HILPDAQ9Y5L2 63 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 PEX16Q9Y5Y5 336 aa10.83□□□□□ -0.68
CLK3-216ENST00000564468 OOSP1A8MZH6 123 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 NPIPB11E5RHQ5 1161 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 AIPO00170 330 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 F2RL2O00254 374 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 ORC5O43913 435 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 BPNT1O95861 308 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 MPIG6BO95866 241 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 IGLV1-47P01700 117 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 CD37P11049 281 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 BRS3P32247 399 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 EMX1Q04741 257 aaPredicted RBP10.82□□□□□ -0.68
CLK3-216ENST00000564468 HLA-DRB5Q30154 266 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 CCDC144NLQ6NUI1 221 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 C11orf88Q6PI97 169 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 TRAT1Q6PIZ9 186 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 ZNF497Q6ZNH5 498 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 TMEM91Q6ZNR0 172 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 DYNAPQ8N1N2 210 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 TMEM104Q8NE00 496 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 OR4P4Q8NGL7 312 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 OR4C13Q8NGP0 309 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 FCGR1BQ92637 280 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 TAF15Q92804 592 aaKnown RBP eCLIP10.82□□□□□ -0.68
CLK3-216ENST00000564468 NEDD4LQ96PU5 975 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 TMEM59Q9BXS4 323 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 NPFFR1Q9GZQ6 430 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 PLGRKTQ9HBL7 147 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 ZNF286AQ9HBT8 521 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 TCF19Q9Y242 345 aa10.82□□□□□ -0.68
CLK3-216ENST00000564468 BUB1B-PAK6H3BSN5 160 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 SLC22A1O15245 554 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 PDCD6O75340 191 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 MT-ND4P03905 459 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 GALP22466 123 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 PAX6P26367 422 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 CALRP27797 417 aaKnown RBP10.81□□□□□ -0.68
CLK3-216ENST00000564468 GDNFP39905 211 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 MNDAP41218 407 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 KIR2DS4P43632 304 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 TMEM30BQ3MIR4 351 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 PLA1AQ53H76 456 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 PRR31Q5SQ13 230 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 C6orf183Q5T699 404 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 BRICD5Q6PL45 260 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 OR52M1Q8NGK5 317 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 RFESDQ8TAC1 157 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 PIFOQ8TCI5 191 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 ARL11Q969Q4 196 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 FAM46BQ96A09 425 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 MMP28Q9H239 520 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 ZNF581Q9P0T4 197 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 FBLN5Q9UBX5 448 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 TRAPPC2LQ9UL33 140 aa10.81□□□□□ -0.68
CLK3-216ENST00000564468 FAM172BPA6NC97 362 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 J3QR06 171 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 SLC17A2O00624 439 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 PDCD5O14737 125 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 SPINT2O43291 252 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 VSIG8P0DPA2 414 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 SSTR5P35346 364 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 FABP5Q01469 135 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 PDLIM3Q53GG5 364 aaPredicted RBP10.8□□□□□ -0.68
CLK3-216ENST00000564468 LDLRAD2Q5SZI1 272 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 SYT6Q5T7P8 510 aaPredicted RBP10.8□□□□□ -0.68
CLK3-216ENST00000564468 BAIAP2L2Q6UXY1 529 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 OR2W3Q7Z3T1 314 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 OR2T6Q8NHC8 308 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 WFDC12Q8WWY7 111 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 AKR1E2Q96JD6 320 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 URM1Q9BTM9 101 aaKnown RBP10.8□□□□□ -0.68
CLK3-216ENST00000564468 NDUFB11Q9NX14 153 aa10.8□□□□□ -0.68
CLK3-216ENST00000564468 A6NDX4 124 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 CCRL2O00421 344 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 ARSBP15848 533 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 MYL9P24844 172 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 RAB13P51153 203 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 PROK1P58294 105 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 RPS27AP62979 156 aaKnown RBP10.79□□□□□ -0.68
CLK3-216ENST00000564468 RAB11BQ15907 218 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 SSX1Q16384 188 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 LTC4SQ16873 150 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 Q3ZCU0 254 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 TPTE2P1Q5T6R2 138 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 UBE2UQ5VVX9 321 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 C16orf82Q7Z2V1 217 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 ZNF554Q86TJ5 538 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 SPARTQ8N0X7 666 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 GAPTQ8N292 157 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 CCDC107Q8WV48 283 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 CAPSLQ8WWF8 208 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 RPEQ96AT9 228 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 TM2D1Q9BX74 207 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 ZNF696Q9H7X3 374 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 KCNIP1Q9NZI2 227 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 PSG11Q9UQ72 335 aa10.79□□□□□ -0.68
CLK3-216ENST00000564468 AK6Q9Y3D8 172 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms