RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 UBE2E2Q96LR5 201 aa12.31□□□□□ -0.44
HERPUD1-205ENST00000562914 RCHY1Q96PM5 261 aa12.31□□□□□ -0.44
HERPUD1-205ENST00000562914 NR1H4Q96RI1 486 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-205ENST00000562914 S1PR3Q99500 378 aa12.31□□□□□ -0.44
HERPUD1-205ENST00000562914 RIBC2Q9H4K1 309 aa12.31□□□□□ -0.44
HERPUD1-205ENST00000562914 IFT22Q9H7X7 185 aa12.31□□□□□ -0.44
HERPUD1-205ENST00000562914 RAB9BQ9NP90 201 aa12.31□□□□□ -0.44
HERPUD1-205ENST00000562914 SNTNA6NMZ2 147 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 J3QRE1 110 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 FCGR1AP12314 374 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 RUNX1Q01196 453 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 MRPL28Q13084 256 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 SLC25A30Q5SVS4 291 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 MEDAGQ5VYS4 303 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 FAM71E2Q8N5Q1 922 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 ACBD7Q8N6N7 88 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 TMEM104Q8NE00 496 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 PLPPR1Q8TBJ4 325 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 MYOZ3Q8TDC0 251 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 RTN4IP1Q8WWV3 396 aaPredicted RBP12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 PELI1Q96FA3 418 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 PLSCR3Q9NRY6 295 aa12.3□□□□□ -0.44
HERPUD1-205ENST00000562914 IGHV3-72A0A0B4J1Y9 119 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 TMEM30CPA0ZSE6 113 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 TMEM212A6NML5 194 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 ORC5O43913 435 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 LY86O95711 162 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 LYL1P12980 280 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 REG1BP48304 166 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 RSU1Q15404 277 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 TMEM30BQ3MIR4 351 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 NHLRC3Q5JS37 347 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 TMEM65Q6PI78 240 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 LINC00596Q86U02 117 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 ST6GALNAC6Q969X2 333 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 GPER1Q99527 375 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 DPCDQ9BVM2 203 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 ZMAT4Q9H898 229 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 PALMDQ9NP74 551 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 IMPAD1Q9NX62 359 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 DHDHQ9UQ10 334 aa12.29□□□□□ -0.44
HERPUD1-205ENST00000562914 A0A1W2PPE3 182 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 J3QLW9 94 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 SDCBPO00560 298 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 ZNF19P17023 458 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 RAB3AP20336 220 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 ZNF137PP52743 207 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 ASCL4Q6XD76 172 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 SYS1Q8N2H4 156 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 SUMF2Q8NBJ7 301 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 TNFAIP8L1Q8WVP5 186 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 ARL11Q969Q4 196 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 RNFT2Q96EX2 444 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 C4orf36Q96KX1 117 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 KCTD7Q96MP8 289 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 GFOD1Q9NXC2 390 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 VSIG4Q9Y279 399 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 AP4S1Q9Y587 144 aa12.28□□□□□ -0.44
HERPUD1-205ENST00000562914 I3L521 148 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 POLR2IP36954 125 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 ZSCAN26Q16670 478 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 PIGYQ3MUY2 71 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 ZNF529Q6P280 563 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 SBSPONQ8IVN8 264 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 OR1N2Q8NGR9 330 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 OR5AK2Q8NH90 309 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 HSPB9Q9BQS6 159 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 JAM3Q9BX67 310 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 PAK1IP1Q9NWT1 392 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 IL36GQ9NZH8 169 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 ZNF107Q9UII5 783 aaPredicted RBP12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 ST3GAL6Q9Y274 331 aa12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 EXOGQ9Y2C4 368 aaKnown RBP12.27□□□□□ -0.45
HERPUD1-205ENST00000562914 LCE6AA0A183 80 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 C15orf65H3BRN8 121 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 GABRPO00591 440 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 OR7C1O76099 320 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 RASSF2P50749 326 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 SNRPGP62308 76 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 GALEQ14376 348 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 MPV17LQ2QL34 196 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 STEAP3Q658P3 488 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 SLC25A48Q6ZT89 311 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 ZNF491Q8N8L2 437 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 TSEN15Q8WW01 171 aaKnown RBP12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 SLC7A6OSQ96CW6 309 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 FAM192AQ9GZU8 254 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 OR51J1Q9H342 316 aa12.26□□□□□ -0.45
HERPUD1-205ENST00000562914 OVOL1O14753 267 aa12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 ZNF780AO75290 641 aaPredicted RBP12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 ATP5HO75947 161 aa12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 HTR3BO95264 441 aa12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 CSTBP04080 98 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 CD2P06729 351 aa12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 PPIFP30405 207 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 RBM11P57052 281 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 SATL1Q86VE3 508 aa12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 STX19Q8N4C7 294 aa12.25□□□□□ -0.45
HERPUD1-205ENST00000562914 CENPNQ96H22 339 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms