RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 USH1CQ9Y6N9 552 aa1.08□□□□□ -2.24
DENND4A-205ENST00000562540 CR1P17927 2039 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 RAB19A4D1S5 217 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 KNCNA6PVL3 124 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 RNASEK-C17orf49H0YIS7 233 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 CDIPTO14735 213 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 FABP7O15540 132 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 SHOX2O60902 331 aaPredicted RBP1.07□□□□□ -2.24
DENND4A-205ENST00000562540 SOX14O95416 240 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 AKR1C4P17516 323 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 ZNF140P52738 457 aaPredicted RBP1.07□□□□□ -2.24
DENND4A-205ENST00000562540 MP68P56378 58 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 TSPAN31Q12999 210 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 APOFQ13790 326 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 OR8G1Q15617 311 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 CLEC20AQ6ZU45 233 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 SSX7Q7RTT5 188 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 IFT81Q8WYA0 676 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 FAAP24Q9BTP7 215 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 POTEKPQ9BYX7 375 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 TTTY12Q9BZ98 90 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 ALX4Q9H161 411 aaPredicted RBP1.07□□□□□ -2.24
DENND4A-205ENST00000562540 GOLPH3Q9H4A6 298 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 RBMX2Q9Y388 322 aaKnown RBP1.07□□□□□ -2.24
DENND4A-205ENST00000562540 WASHC3Q9Y3C0 194 aa1.07□□□□□ -2.24
DENND4A-205ENST00000562540 ATRNO75882 1429 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 SHANK3Q9BYB0 1731 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 IGSF23A1L1A6 192 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 ERICH4A6NGS2 130 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 FAM183AA6NL82 134 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 TMEM250H0YL14 139 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 NDUFS8O00217 210 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 FGF16O43320 207 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 DENRO43583 198 aaKnown RBP1.06□□□□□ -2.24
DENND4A-205ENST00000562540 ZMPSTE24O75844 475 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 CPMP14384 443 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 INPP1P49441 399 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 UBE2KP61086 200 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 KRTAP21-3Q3LHN1 58 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 Q6ZRU5 148 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 Q6ZT83 130 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 FAM19A3Q7Z5A8 133 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 ACBD4Q8NC06 268 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 OR4C16Q8NGL9 310 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 LRRC20Q8TCA0 184 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 DTD1Q8TEA8 209 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 CATSPER2Q96P56 530 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 PRSS27Q9BQR3 290 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 TXNDC17Q9BRA2 123 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 TAPBPLQ9BX59 468 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 EBPLQ9BY08 206 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 METTL8Q9H825 291 aaKnown RBP1.06□□□□□ -2.24
DENND4A-205ENST00000562540 IFT46Q9NQC8 304 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 NCKAP5O14513 1909 aa1.06□□□□□ -2.24
DENND4A-205ENST00000562540 RP1L1Q8IWN7 2480 aaPredicted RBP1.06□□□□□ -2.24
DENND4A-205ENST00000562540 VWDEQ8N2E2 1590 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 ODF3BA8MYP8 253 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 K7EQS6 105 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 PSMD11O00231 422 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 PLPP3O14495 311 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 S1PR2O95136 353 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 LTAP01374 205 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 CD164Q04900 197 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 FAM162BQ5T6X4 162 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 FAM183BPQ6ZVS7 135 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 ST13P4Q8IZP2 240 aaPredicted RBP1.05□□□□□ -2.24
DENND4A-205ENST00000562540 C2orf73Q8N5S3 287 aaPredicted RBP1.05□□□□□ -2.24
DENND4A-205ENST00000562540 RNASE11Q8TAA1 199 aaKnown RBP1.05□□□□□ -2.24
DENND4A-205ENST00000562540 FAM45AQ8TCE6 357 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 LRRC39Q96DD0 335 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 PGLYRP3Q96LB9 341 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 DNAJC30Q96LL9 226 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 RAB1BQ9H0U4 201 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 HAUS4Q9H6D7 363 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 CLEC2DQ9UHP7 191 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 PSORS1C2Q9UIG4 136 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 FREM1Q5H8C1 2179 aa1.05□□□□□ -2.24
DENND4A-205ENST00000562540 A0A1B0GW15 77 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 A8MWP6 167 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 FNDC10F2Z333 226 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 F8VP50 259 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 RAB36O95755 333 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 OR4A8P0C604 315 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 NQO1P15559 274 aaKnown RBP1.04□□□□□ -2.24
DENND4A-205ENST00000562540 ZNF7P17097 686 aaPredicted RBP1.04□□□□□ -2.24
DENND4A-205ENST00000562540 ATF1P18846 271 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 GABRA3P34903 492 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 GABRA4P48169 554 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 AKR1C2P52895 323 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 AQP5P55064 265 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 OR2B6P58173 313 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 C1QTNF8P60827 252 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 TNNC1P63316 161 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 C18orf21Q32NC0 220 aaPredicted RBP1.04□□□□□ -2.24
DENND4A-205ENST00000562540 BSXQ3C1V8 233 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 AHSA2Q719I0 299 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 TMEM25Q86YD3 366 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 MUC15Q8N387 334 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 TRIML2Q8N7C3 387 aa1.04□□□□□ -2.24
DENND4A-205ENST00000562540 OR9I1Q8NGQ6 314 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms