RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 DYRK2Q92630 601 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 AJUBAQ96IF1 538 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 KIRREL1Q96J84 757 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 LIN7BQ9HAP6 207 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 IDI2-AS1Q9NZ38 188 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 RAB22AQ9UL26 194 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 POMT1Q9Y6A1 747 aa13.59□□□□□ -0.23
CLK3-207ENST00000562389 SMIM30A4D0T7 59 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 FOXI3A8MTJ6 420 aaPredicted RBP13.58□□□□□ -0.24
CLK3-207ENST00000562389 ORC5O43913 435 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 AIREO43918 545 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 RNASE1P07998 156 aaKnown RBP13.58□□□□□ -0.24
CLK3-207ENST00000562389 RAB6AP20340 208 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 BLVRBP30043 206 aaPredicted RBP13.58□□□□□ -0.24
CLK3-207ENST00000562389 SSTR5P35346 364 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 IER3P46695 156 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 SFXN4Q6P4A7 337 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 BAIAP2L2Q6UXY1 529 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 C6orf201Q7Z4U5 140 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 BEND2Q8NDZ0 799 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 OR13F1Q8NGS4 319 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 C17orf50Q8WW18 174 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 DUX5Q96PT3 197 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 SULT4A1Q9BR01 284 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 C19orf24Q9BVV8 132 aa13.58□□□□□ -0.24
CLK3-207ENST00000562389 MRPS26Q9BYN8 205 aaKnown RBP13.58□□□□□ -0.24
CLK3-207ENST00000562389 TRAV39A0A0B4J263 110 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 C15orf65H3BRN8 121 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 SOCS1O15524 211 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 SLC2A2P11168 524 aaPredicted RBP13.57□□□□□ -0.24
CLK3-207ENST00000562389 PLA2G7Q13093 441 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 DYNC1I2Q13409 638 aaKnown RBP13.57□□□□□ -0.24
CLK3-207ENST00000562389 FAM189A2Q15884 450 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 C6orf183Q5T699 404 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 MINOS1Q5TGZ0 78 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 TRAT1Q6PIZ9 186 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 LHFPL4Q7Z7J7 247 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 ABHD12Q8N2K0 398 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.57□□□□□ -0.24
CLK3-207ENST00000562389 OR56B1Q8NGI3 324 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 MRPL30Q8TCC3 161 aaKnown RBP13.57□□□□□ -0.24
CLK3-207ENST00000562389 CCDC107Q8WV48 283 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 PTX4Q96A99 478 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 CYYR1Q96J86 154 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 MEGF9Q9H1U4 602 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 DPAGT1Q9H3H5 408 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 ZNF286AQ9HBT8 521 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 PLEKHJ1Q9NW61 149 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 TRAPPC2LQ9UL33 140 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 HSF4Q9ULV5 492 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 MINOS1-NBL1R4GNA1 71 aa13.57□□□□□ -0.24
CLK3-207ENST00000562389 A0A0B4J203 849 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 CLEC2LP0C7M8 214 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 VEGFCP49767 419 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 EFNB2P52799 333 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 MXD1Q05195 221 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 OR4P4Q8NGL7 312 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 OR4K15Q8NH41 348 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 ZNF596Q8TC21 504 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 ARL11Q969Q4 196 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 FAAP24Q9BTP7 215 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 FUNDC2Q9BWH2 189 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 RAB9BQ9NP90 201 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 MBNL3Q9NUK0 354 aaKnown RBP13.56□□□□□ -0.24
CLK3-207ENST00000562389 DAPK2Q9UIK4 370 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 ATRQ13535 2644 aa13.56□□□□□ -0.24
CLK3-207ENST00000562389 FAM172BPA6NC97 362 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 IGLV1-47P01700 117 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 IGHV4-59P01825 116 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 NFYBP25208 207 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 TMEM50BP56557 158 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 AANATQ16613 207 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 LDLRAD2Q5SZI1 272 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 C16orf87Q6PH81 154 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 SLC16A12Q6ZSM3 486 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 Q6ZTK2 550 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 ZNF554Q86TJ5 538 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 OR52M1Q8NGK5 317 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 RFESDQ8TAC1 157 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 MALSU1Q96EH3 234 aa13.55□□□□□ -0.24
CLK3-207ENST00000562389 C12orf77C9JDV5 145 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 F2RL2O00254 374 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 TMEM127O75204 238 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 NAPSAO96009 420 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 TGFBR1P36897 503 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 SCAND1P57086 179 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 LRRC75BQ2VPJ9 315 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 HLA-DRB5Q30154 266 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 TMEM30BQ3MIR4 351 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 OR5R1Q8NH85 324 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 OR9G1Q8NH87 305 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 ARHGAP5-AS1Q96IT6 56 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 PECRQ9BY49 303 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 CHIAQ9BZP6 476 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 RIMS4Q9H426 269 aaPredicted RBP13.54□□□□□ -0.24
CLK3-207ENST00000562389 AK3Q9UIJ7 227 aa13.54□□□□□ -0.24
CLK3-207ENST00000562389 TRBV6-6A0A0A6YYG2 114 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 METTL21EPA6NDL7 271 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 BTBD17A6NE02 478 aa13.53□□□□□ -0.24
CLK3-207ENST00000562389 VGLL3A8MV65 326 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms