RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 SSNA1O43805 119 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 CREBL2O60519 120 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 OR2H2O95918 312 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 LHBP01229 141 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 IFNA6P05013 189 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 GRPP07492 148 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 GSTT2P0CG29 244 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ANXA3P12429 323 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 PPP3CBP16298 524 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 HLA-GP17693 338 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 FPR2P25090 351 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 LMO1P25800 156 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 LOXP28300 417 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 RBMXP38159 391 aaKnown RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 NPY4RP50391 375 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ASCL1P50553 236 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 H2BFSP57053 126 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 KLF3P57682 345 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 UBE2MP61081 183 aaKnown RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 SUPT4H1P63272 117 aaKnown RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 IFITM2Q01629 132 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 DHRS2Q13268 280 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 IKZF1Q13422 519 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 PPP1R1AQ13522 171 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 HERPUD1Q15011 391 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 SURF2Q15527 256 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 HFEQ30201 348 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 CHRFAM7AQ494W8 412 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ZFP69Q49AA0 526 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 LY6G6FQ5SQ64 297 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ACP7Q6ZNF0 438 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 LYG2Q86SG7 212 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 OR2AK2Q8NG84 335 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 OR11H4Q8NGC9 324 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 OR10Z1Q8NGY1 313 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 PLPPR1Q8TBJ4 325 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 CCDC107Q8WV48 283 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 MITD1Q8WV92 249 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 MRPL24Q96A35 216 aaKnown RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ZNF486Q96H40 463 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 DPCDQ9BVM2 203 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 FXYD6Q9H0Q3 95 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 WDR13Q9H1Z4 485 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ZNF442Q9H7R0 627 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 SPACA1Q9HBV2 294 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 GPN1Q9HCN4 374 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ZNF701Q9NV72 531 aaPredicted RBP5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ING3Q9NXR8 418 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 TREM2Q9NZC2 230 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 EHFQ9NZC4 300 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 MGAT4CQ9UBM8 478 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ZNF462Q96JM2 2506 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 NBASA2RRP1 2371 aa5.49□□□□□ -1.53
CAPN3-210ENST00000561817 ADGRG4Q8IZF6 3080 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 IGHV3-64DA0A0J9YX35 117 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 A1L4Q6 167 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 SRRM5B3KS81 715 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 SHISA9B4DS77 424 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 MCRIP1C9JLW8 97 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 CCL21O00585 134 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 DEGS1O15121 323 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 KNG1P01042 644 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 S100A9P06702 114 aaKnown RBP5.48□□□□□ -1.53
CAPN3-210ENST00000561817 S100A6P06703 90 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 ADH4P08319 380 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 GIPP09681 153 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-210ENST00000561817 OR5H8P0DN80 308 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 EGR1P18146 543 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 GLRA1P23415 457 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 ERP29P30040 261 aaKnown RBP5.48□□□□□ -1.53
CAPN3-210ENST00000561817 CHRNB4P30926 498 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 OR3A3P47888 321 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 KCNJ3P48549 501 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 UCP3P55916 312 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 RPS23P62266 143 aaKnown RBP5.48□□□□□ -1.53
CAPN3-210ENST00000561817 RPP30P78346 268 aaKnown RBP5.48□□□□□ -1.53
CAPN3-210ENST00000561817 PAX5Q02548 391 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 BSPH1Q075Z2 132 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 TFF3Q07654 80 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 AARDQ4LEZ3 155 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 C9orf152Q5JTZ5 239 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 SPIN3Q5JUX0 258 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 NCMAPQ5T1S8 102 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 DCAF12L2Q5VW00 463 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 TMEM108Q6UXF1 575 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 ZNF497Q6ZNH5 498 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 TMED4Q7Z7H5 227 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 LDLRAD3Q86YD5 345 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 C9orf62Q8N4C0 152 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 C12orf45Q8N5I9 185 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-210ENST00000561817 LILRB4Q8NHJ6 448 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 ZFAND1Q8TCF1 268 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 RNASE6Q93091 150 aaKnown RBP5.48□□□□□ -1.53
CAPN3-210ENST00000561817 LRRC46Q96FV0 321 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 DHRS9Q9BPW9 319 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 SYT3Q9BQG1 590 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 ZNF2Q9BSG1 426 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-210ENST00000561817 CABLES2Q9BTV7 478 aa5.48□□□□□ -1.53
CAPN3-210ENST00000561817 RIMS4Q9H426 269 aaPredicted RBP5.48□□□□□ -1.53
CAPN3-210ENST00000561817 GSX1Q9H4S2 264 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms