RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 J3QR06 171 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 TIMM23O14925 209 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 MT-ND4P03905 459 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 SRMP19623 302 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 SSTR5P35346 364 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 CEACAM3P40198 252 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 MLLT11Q13015 90 aaPredicted RBP12.43□□□□□ -0.42
CCDC113-203ENST00000561517 HSD17B12Q53GQ0 312 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 TPTE2P1Q5T6R2 138 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 GLT8D1Q68CQ7 371 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 TREML4Q6UXN2 200 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 SLC16A12Q6ZSM3 486 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 OR2T6Q8NHC8 308 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 CNBD2Q96M20 576 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 SELENOIQ9C0D9 397 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 CCDC90BQ9GZT6 254 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 MMP28Q9H239 520 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 ZNF702PQ9H963 129 aa12.43□□□□□ -0.42
CCDC113-203ENST00000561517 MCRIP1C9JLW8 97 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 C15orf65H3BRN8 121 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 ORC5O43913 435 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 CRTAPO75718 401 aaPredicted RBP12.42□□□□□ -0.42
CCDC113-203ENST00000561517 GLAP06280 429 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 UBBP0CG47 229 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 HSMCR30P0CW71 290 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 CPEP16870 476 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 BRS3P32247 399 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 RBM39Q14498 530 aaKnown RBP12.42□□□□□ -0.42
CCDC113-203ENST00000561517 TRAM1Q15629 374 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 SIGIRRQ6IA17 410 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 RAB12Q6IQ22 244 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 TMEM91Q6ZNR0 172 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 GAPTQ8N292 157 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 OR52M1Q8NGK5 317 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 NEK7Q8TDX7 302 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 BLOC1S6Q9UL45 172 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 PSG11Q9UQ72 335 aa12.42□□□□□ -0.42
CCDC113-203ENST00000561517 H3BUI4 141 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 M0QZ24 198 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 AIPO00170 330 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 CA11O75493 328 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 FUT3P21217 361 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 PSMA1P25786 263 aaKnown RBP12.41□□□□□ -0.42
CCDC113-203ENST00000561517 VHLP40337 213 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 MAP2K4P45985 399 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 ARHGDIBP52566 201 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 RPS25P62851 125 aaKnown RBP12.41□□□□□ -0.42
CCDC113-203ENST00000561517 TBCEQ15813 527 aaPredicted RBP12.41□□□□□ -0.42
CCDC113-203ENST00000561517 CCDC144NLQ6NUI1 221 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 C16orf82Q7Z2V1 217 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 LEAP2Q969E1 77 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 ARL11Q969Q4 196 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 TMEM203Q969S6 136 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 MGLLQ99685 303 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 CST11Q9H112 138 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 SERTAD4Q9NUC0 356 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 ETAA1Q9NY74 926 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 AMMECR1Q9Y4X0 333 aaPredicted RBP12.41□□□□□ -0.42
CCDC113-203ENST00000561517 PEX16Q9Y5Y5 336 aa12.41□□□□□ -0.42
CCDC113-203ENST00000561517 IGHV3-7P01780 117 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 VSIG8P0DPA2 414 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 LOXL3P58215 753 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 HERPUD1Q15011 391 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 LTC4SQ16873 150 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 KLHDC1Q8N7A1 406 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 CCDC107Q8WV48 283 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 CFHR4Q92496 578 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 FAM46BQ96A09 425 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 PRSS22Q9GZN4 317 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 LIN7BQ9HAP6 207 aa12.4□□□□□ -0.42
CCDC113-203ENST00000561517 FAM90A9PA6NNJ1 464 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 SLC22A1O15245 554 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 PDCD6O75340 191 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 MPIG6BO95866 241 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 CD24P25063 80 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 HTR2CP28335 458 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 MNDAP41218 407 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 BLCAPP62952 87 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 QRFPP83859 136 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 MADCAM1Q13477 382 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 HABP2Q14520 560 aaPredicted RBP12.39□□□□□ -0.43
CCDC113-203ENST00000561517 FBLN7Q53RD9 439 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 SYT6Q5T7P8 510 aaPredicted RBP12.39□□□□□ -0.43
CCDC113-203ENST00000561517 LINC00311Q8N616 119 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 C8orf31Q8N9H6 132 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 KCNG3Q8TAE7 436 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 TOMM40LQ969M1 308 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 RPEQ96AT9 228 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 GFI1Q99684 422 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 GFOD1Q9NXC2 390 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 NOTCH1P46531 2555 aa12.39□□□□□ -0.43
CCDC113-203ENST00000561517 A0A1W2PPI3 338 aa12.38□□□□□ -0.43
CCDC113-203ENST00000561517 TMEM14DPA8MWL7 114 aa12.38□□□□□ -0.43
CCDC113-203ENST00000561517 C12orf77C9JDV5 145 aa12.38□□□□□ -0.43
CCDC113-203ENST00000561517 ARL6IP5O75915 188 aa12.38□□□□□ -0.43
CCDC113-203ENST00000561517 OR2F2O95006 317 aa12.38□□□□□ -0.43
CCDC113-203ENST00000561517 BPNT1O95861 308 aa12.38□□□□□ -0.43
CCDC113-203ENST00000561517 GNG10P50151 68 aa12.38□□□□□ -0.43
CCDC113-203ENST00000561517 GABARAPL2P60520 117 aa12.38□□□□□ -0.43
CCDC113-203ENST00000561517 RPS27AP62979 156 aaKnown RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms