RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 SPNP16150 400 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 TSPOP30536 169 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 HSPA13P48723 471 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 PRDX1Q06830 199 aaKnown RBP1.39□□□□□ -2.19
USP8-218ENST00000561330 HNRNPA1L2Q32P51 320 aaKnown RBP1.39□□□□□ -2.19
USP8-218ENST00000561330 LAMTOR1Q6IAA8 161 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 DGAT2L6Q6ZPD8 337 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 Q6ZSA8 131 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 PDCL2Q8N4E4 241 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 LGALS14Q8TCE9 139 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 MITD1Q8WV92 249 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 BCL7BQ9BQE9 202 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 HEY1Q9Y5J3 304 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 ARAP3Q8WWN8 1544 aa1.39□□□□□ -2.19
USP8-218ENST00000561330 TENM1Q9UKZ4 2725 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 TRAV8-2A0A0B4J237 113 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 DENRO43583 198 aaKnown RBP1.38□□□□□ -2.19
USP8-218ENST00000561330 LTAP01374 205 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 INPP1P49441 399 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 HTR4Q13639 388 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 TRIP13Q15645 432 aaPredicted RBP1.38□□□□□ -2.19
USP8-218ENST00000561330 CAVIN4Q5BKX8 364 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 FAM19A3Q7Z5A8 133 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 DCANP1Q8TF63 244 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 EBPLQ9BY08 206 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 POTEKPQ9BYX7 375 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 RMND1Q9NWS8 449 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 FBXL3Q9UKT7 428 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 BZW2Q9Y6E2 419 aaKnown RBP1.38□□□□□ -2.19
USP8-218ENST00000561330 ADAMTS7Q9UKP4 1686 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 DOCK10Q96BY6 2186 aa1.38□□□□□ -2.19
USP8-218ENST00000561330 hCG_2039718K7EN88 272 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 FGF16O43320 207 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 OTCP00480 354 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 CRYGDP07320 174 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 RPA3P35244 121 aaPredicted RBP1.37□□□□□ -2.19
USP8-218ENST00000561330 MAGEA3P43357 314 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 MP68P56378 58 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 RAB2AP61019 212 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 VAMP3Q15836 100 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 SDIM1Q6ZPB5 146 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 FAM183BPQ6ZVS7 135 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 OR2AE1Q8NHA4 323 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 ERMNQ8TAM6 284 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 WASHC3Q9Y3C0 194 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 OR51B4Q9Y5P0 310 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 CRB1P82279 1406 aa1.37□□□□□ -2.19
USP8-218ENST00000561330 PRRC2BQ5JSZ5 2229 aaKnown RBP1.36□□□□□ -2.19
USP8-218ENST00000561330 IGKV1-12A0A0C4DH73 117 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 IGKV2-29A2NJV5 120 aaPredicted RBP1.36□□□□□ -2.19
USP8-218ENST00000561330 SIGLEC16A6NMB1 481 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 RNASEK-C17orf49H0YIS7 233 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 ZMPSTE24O75844 475 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 IGKV1D-12P01611 117 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 COL4A2P08572 1712 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 OR4A8P0C604 315 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 NQO1P15559 274 aaKnown RBP1.36□□□□□ -2.19
USP8-218ENST00000561330 PTNP21246 168 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 GABRA3P34903 492 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 SPAM1P38567 509 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 OR2B6P58173 313 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 TRAM1Q15629 374 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 DTD1Q8TEA8 209 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 CIDECQ96AQ7 238 aaPredicted RBP1.36□□□□□ -2.19
USP8-218ENST00000561330 ZNF625Q96I27 306 aaPredicted RBP1.36□□□□□ -2.19
USP8-218ENST00000561330 OR52B2Q96RD2 323 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 TMBIM4Q9HC24 238 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 USH1CQ9Y6N9 552 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 MINOS1-NBL1R4GNA1 71 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 COL18A1P39060 1754 aa1.36□□□□□ -2.19
USP8-218ENST00000561330 HELZ2Q9BYK8 2649 aaKnown RBP1.35□□□□□ -2.19
USP8-218ENST00000561330 MUC21A0A0G2JKD1 596 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 MUC21A0A140T8X8 626 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 MGAT4DA6NG13 374 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 RWDD2BP57060 319 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 ZNF117Q03924 483 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 FAM229BQ4G0N7 80 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 FAM162BQ5T6X4 162 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 CCDC121Q6ZUS5 278 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 SSX6Q7RTT6 188 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 DEFB119Q8N690 84 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 ZFAND2AQ8N6M9 145 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 ACBD4Q8NC06 268 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 TAPBPLQ9BX59 468 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 FBXL15Q9H469 300 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 MTCH2Q9Y6C9 303 aa1.35□□□□□ -2.19
USP8-218ENST00000561330 STRCP1A6NGW2 1772 aa1.34□□□□□ -2.19
USP8-218ENST00000561330 KMT2BQ9UMN6 2715 aaPredicted RBP1.34□□□□□ -2.19
USP8-218ENST00000561330 PSMD11O00231 422 aa1.34□□□□□ -2.19
USP8-218ENST00000561330 TSPAN5P62079 268 aa1.34□□□□□ -2.19
USP8-218ENST00000561330 N4BP2L1Q5TBK1 243 aaPredicted RBP1.34□□□□□ -2.19
USP8-218ENST00000561330 HES3Q5TGS1 186 aa1.34□□□□□ -2.19
USP8-218ENST00000561330 GLT1D1Q96MS3 346 aa1.34□□□□□ -2.19
USP8-218ENST00000561330 PLXNA3P51805 1871 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 VPS37CA5D8V6 355 aaPredicted RBP1.33□□□□□ -2.2
USP8-218ENST00000561330 K7EQS6 105 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 SHOX2O60902 331 aaPredicted RBP1.33□□□□□ -2.2
USP8-218ENST00000561330 AKR1C4P17516 323 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 LPAR6P43657 344 aa1.33□□□□□ -2.2
USP8-218ENST00000561330 AKR1C2P52895 323 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms