RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 LPAR5Q9H1C0 372 aa12.34□□□□□ -0.43
SNRPA1-213ENST00000560856 IDI2-AS1Q9NZ38 188 aa12.34□□□□□ -0.43
SNRPA1-213ENST00000560856 FBLN5Q9UBX5 448 aa12.34□□□□□ -0.43
SNRPA1-213ENST00000560856 MINOS1-NBL1R4GNA1 71 aa12.34□□□□□ -0.43
SNRPA1-213ENST00000560856 V9GY05 133 aa12.34□□□□□ -0.43
SNRPA1-213ENST00000560856 FOXI3A8MTJ6 420 aaPredicted RBP12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 H3BUX3 64 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 NDUFA7O95182 113 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 JUNBP17275 347 aaPredicted RBP12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 GZMHP20718 246 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 CFPP27918 469 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 SSTR5P35346 364 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 CLDN12P56749 244 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 OR10A3P58181 314 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 RBM39Q14498 530 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 RAB11BQ15907 218 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 SSX2Q16385 188 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 C22orf42Q6IC83 251 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 OR2W3Q7Z3T1 314 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 FAM89BQ8N5H3 189 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 OR10A7Q8NGE5 316 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 CCDC107Q8WV48 283 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 SULT4A1Q9BR01 284 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 NICN1Q9BSH3 213 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 TMEM59Q9BXS4 323 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 PLGRKTQ9HBL7 147 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 TXNL4BQ9NX01 149 aaKnown RBP12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 ETAA1Q9NY74 926 aa12.33□□□□□ -0.44
SNRPA1-213ENST00000560856 LY6LH3BQJ8 138 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 CA11O75493 328 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 ARSBP15848 533 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 MDKP21741 143 aaPredicted RBP12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 PSMD7P51665 324 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 PLA2G7Q13093 441 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 C2orf76Q3KRA6 126 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 OR51D1Q8NGF3 324 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 NEK7Q8TDX7 302 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 FAM3DQ96BQ1 224 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 OR51E2Q9H255 320 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 STUB1Q9UNE7 303 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 MMP24Q9Y5R2 645 aa12.32□□□□□ -0.44
SNRPA1-213ENST00000560856 UBE2QL1A1L167 161 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 TRIM64CA6NLI5 447 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 H3BUI4 141 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 AIPO00170 330 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 ORC5O43913 435 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 NFYBP25208 207 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 HTR1DP28221 377 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 RAB13P51153 203 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 DYNLT3P51808 116 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 TMEM50BP56557 158 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 LOXL3P58215 753 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 NEDD8Q15843 81 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 HLA-DRB5Q30154 266 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 HES5Q5TA89 166 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 FAM53AQ6NSI3 398 aaPredicted RBP12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 GDPGP1Q6ZNW5 385 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 C6orf201Q7Z4U5 140 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 OR4K15Q8NH41 348 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 OR9G1Q8NH87 305 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 UBALD1Q8TB05 177 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 ZNF596Q8TC21 504 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 MRPL30Q8TCC3 161 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 LEAP2Q969E1 77 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 ARL11Q969Q4 196 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 MBNL3Q9NUK0 354 aaKnown RBP12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 DPM3Q9P2X0 92 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 STEAP1Q9UHE8 339 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 PSG11Q9UQ72 335 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 HILPDAQ9Y5L2 63 aa12.31□□□□□ -0.44
SNRPA1-213ENST00000560856 TMEM272A0A1B0GTI8 110 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 BTBD17A6NE02 478 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 IFITM5A6NNB3 132 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 C12orf77C9JDV5 145 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 BUB1B-PAK6H3BSN5 160 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 J3QR06 171 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 F2RL2O00254 374 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 PDCD5O14737 125 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 SOCS1O15524 211 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 CRYBA1P05813 215 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 RCC1P18754 421 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 RAB3BP20337 219 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 BLVRBP30043 206 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 RAG2P55895 527 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 FAM189A2Q15884 450 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 LY6EQ16553 131 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 LTC4SQ16873 150 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 PLA1AQ53H76 456 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 CCBE1Q6UXH8 406 aaPredicted RBP12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 Q6ZPA2 131 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 SLC16A12Q6ZSM3 486 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 Q6ZSV7 163 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 C5orf24Q7Z6I8 188 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 OR52M1Q8NGK5 317 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 NDNFQ8TB73 568 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 NEDD4LQ96PU5 975 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 FAAP24Q9BTP7 215 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 ZNF696Q9H7X3 374 aa12.3□□□□□ -0.44
SNRPA1-213ENST00000560856 A6NDX4 124 aa12.29□□□□□ -0.44
SNRPA1-213ENST00000560856 CHST1O43916 411 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms