RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 GATBO75879 557 aaKnown RBP7.81□□□□□ -1.16
TPM1-225ENST00000560679 ARL6IP5O75915 188 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 HNRNPCP07910 306 aaKnown RBP eCLIP7.81□□□□□ -1.16
TPM1-225ENST00000560679 UCHL1P09936 223 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 IL7P13232 177 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 SPNP16150 400 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 SLC6A1P30531 599 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 ECI1P42126 302 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 RANBP1P43487 201 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 OR3A4PP47883 348 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 BLVRAP53004 296 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 RAB25P57735 213 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 PSMA6P60900 246 aaKnown RBP7.81□□□□□ -1.16
TPM1-225ENST00000560679 DEFB136Q30KP8 78 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 CNIH2Q6PI25 160 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 KCTD18Q6PI47 426 aaPredicted RBP7.81□□□□□ -1.16
TPM1-225ENST00000560679 DRAXINQ8NBI3 349 aaPredicted RBP7.81□□□□□ -1.16
TPM1-225ENST00000560679 OR13C5Q8NGS8 318 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 CAPSLQ8WWF8 208 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 HIST1H2AAQ96QV6 131 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 INTS14Q96SY0 518 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 SOSTQ9BQB4 213 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 CLEC7AQ9BXN2 247 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 TMEM133Q9H2Q1 129 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 COMMD3Q9UBI1 195 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 TBC1D24Q9ULP9 559 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 HHLA2Q9UM44 414 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 KLHDC2Q9Y2U9 406 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 TMEM14AQ9Y6G1 99 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 SESN1Q9Y6P5 492 aa7.81□□□□□ -1.16
TPM1-225ENST00000560679 TRBV2A0A0J9YWF9 115 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 J3QT63 122 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 CCL24O00175 119 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 HPGDSO60760 199 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 NOS1APO75052 506 aaPredicted RBP7.8□□□□□ -1.16
TPM1-225ENST00000560679 NXPH2O95156 264 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 KRT8P05787 483 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 H2BFMP0C1H6 154 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 HTR1DP28221 377 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 EDDM3BP56851 147 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 RPS11P62280 158 aaKnown RBP eCLIP7.8□□□□□ -1.16
TPM1-225ENST00000560679 SCN1BQ07699 218 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 ASAH1Q13510 395 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 PYDC2Q56P42 97 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 C9orf152Q5JTZ5 239 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 FAM27D1Q5T7N8 215 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 C9orf66Q5T8R8 295 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 PLCXD3Q63HM9 321 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 SFXN4Q6P4A7 337 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 MOB3CQ70IA8 216 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 GDPD3Q7L5L3 318 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 NR2C2APQ86WQ0 139 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 ZNF695Q8IW36 515 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 ZNF676Q8N7Q3 588 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 YIPF7Q8N8F6 280 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 ASCC1Q8N9N2 400 aaKnown RBP7.8□□□□□ -1.16
TPM1-225ENST00000560679 OR5A2Q8NGI9 324 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 CITED4Q96RK1 184 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 PPIL3Q9H2H8 161 aaKnown RBP7.8□□□□□ -1.16
TPM1-225ENST00000560679 MRM2Q9UI43 246 aaKnown RBP7.8□□□□□ -1.16
TPM1-225ENST00000560679 LAMP5Q9UJQ1 280 aa7.8□□□□□ -1.16
TPM1-225ENST00000560679 TMEM82A0PJX8 343 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 NOTOA8MTQ0 251 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 FAM25AB3EWG3 89 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 FAM25CB3EWG5 89 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 FAM25GB3EWG6 89 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 BOLA2-SMG1P6H3BVE0 249 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 IGLV3-1P01715 115 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 HLA-DQB1P01920 261 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 ALOX5APP20292 161 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 RAB3BP20337 219 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 MPZP25189 248 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 HAAOP46952 286 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 ERVK11-1P61568 191 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 ALKBH1Q13686 389 aaKnown RBP7.79□□□□□ -1.16
TPM1-225ENST00000560679 BAK1Q16611 211 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 HSD17B12Q53GQ0 312 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 YIF1BQ5BJH7 314 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 IDNKQ5T6J7 187 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 CADM3Q8N126 398 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 TPRX1Q8N7U7 411 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 ASB17Q8WXJ9 295 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 RGP1Q92546 391 aaPredicted RBP7.79□□□□□ -1.16
TPM1-225ENST00000560679 RNF166Q96A37 237 aaPredicted RBP7.79□□□□□ -1.16
TPM1-225ENST00000560679 NEURL2Q9BR09 285 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 NIPAL2Q9H841 368 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 ZFP57Q9NU63 452 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 DPM3Q9P2X0 92 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 LINC00527Q9UJ94 153 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 IKZF2Q9UKS7 526 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 SLC22A13Q9Y226 551 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 ZNF256Q9Y2P7 627 aaPredicted RBP7.79□□□□□ -1.16
TPM1-225ENST00000560679 MOB4Q9Y3A3 225 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 LINC00312Q9Y6C7 94 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 SMAD5-AS1Q9Y6J3 95 aa7.79□□□□□ -1.16
TPM1-225ENST00000560679 HECTD4Q9Y4D8 3996 aa7.78□□□□□ -1.16
TPM1-225ENST00000560679 TRBV5-5A0A0J9YX44 114 aa7.78□□□□□ -1.16
TPM1-225ENST00000560679 A0A0U1RQV5 110 aa7.78□□□□□ -1.16
TPM1-225ENST00000560679 PQLC2LA1A4F0 135 aa7.78□□□□□ -1.16
TPM1-225ENST00000560679 FAM172BPA6NC97 362 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms