RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 FAM157AC9JC47 383 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 APCSP02743 223 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 MT-ND6P03923 174 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 MMP9P14780 707 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 ATP6V0CP27449 155 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 SMAGPQ0VAQ4 97 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 SLC35E4Q6ICL7 350 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 WDR74Q6RFH5 385 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 BHLHA15Q7RTS1 189 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 SSX8Q7RTT4 187 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 ZNF519Q8TB69 540 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 SNRNP40Q96DI7 357 aaKnown RBP11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 TMEM38BQ9NVV0 291 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 COA4Q9NYJ1 87 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 IL19Q9UHD0 177 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 ANKRD36CQ5JPF3 1778 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 NUP214P35658 2090 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 MAST2Q6P0Q8 1798 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 TRAV8-7A0A075B6U6 113 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 IFITM10A6NMD0 228 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 SYNGR1O43759 233 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 GAPDHP04406 335 aaKnown RBP11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 ACAA1P09110 424 aaPredicted RBP11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 GCSHP23434 173 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 TMEM91Q6ZNR0 172 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 RBPMS2Q6ZRY4 209 aaKnown RBP11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 C1orf174Q8IYL3 243 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 WDR31Q8NA23 367 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 OR4D11Q8NGI4 311 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 PGLYRP3Q96LB9 341 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 RNF122Q9H9V4 155 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 INSIG2Q9Y5U4 225 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 NPTNQ9Y639 398 aa11.58□□□□□ -0.56
CSPG4P11-201ENST00000560634 IGF2P01344 180 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 KIR2DL1P43626 348 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 KIR2DL2P43627 348 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 IER3P46695 156 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 C9orf50Q5SZB4 431 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 SLC23A3Q6PIS1 610 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 SLC25A40Q8TBP6 338 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 HARBI1Q96MB7 349 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 ASXL3Q9C0F0 2248 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 F2RL2O00254 374 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 FOXC1Q12948 553 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 INO80CQ6PI98 192 aaPredicted RBP11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 LRRC75AQ8NAA5 344 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 SAP30LQ9HAJ7 183 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 TINAGQ9UJW2 476 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 LTBP4Q8N2S1 1624 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 BGLAPP02818 100 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 FAM219BQ5XKK7 198 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 GPR35Q9HC97 309 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 SSC5DA1L4H1 1573 aa11.57□□□□□ -0.56
CSPG4P11-201ENST00000560634 LAMA4Q16363 1823 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 FAM90A27PA6NNH2 459 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 PITX3O75364 302 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 IGHV3-13P01766 116 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 IGHV3-7P01780 117 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 ZNF79Q15937 498 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 TMEM92Q6UXU6 159 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 PRR13Q9NZ81 148 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 ELF5Q9UKW6 265 aaPredicted RBP11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 TCFL5Q9UL49 500 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 ZFP30Q9Y2G7 519 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 GLI3P10071 1580 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 C21orf140B9A014 251 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 TMEM50BP56557 158 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 VAX1Q5SQQ9 334 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 COL5A1-AS1Q5SY13 56 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 TUSC5Q8IXB3 177 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 ZNF383Q8NA42 475 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 MPDU1O75352 247 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 PNLIPP16233 465 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 A8MWL6 223 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 BCL2P10415 239 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 NSUN5P2Q63ZY6 315 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 PPP1R3EQ9H7J1 279 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 ITGB4P16144 1822 aa11.56□□□□□ -0.56
CSPG4P11-201ENST00000560634 J3QR06 171 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 IZUMO4Q1ZYL8 232 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 MOGAT3Q86VF5 341 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 TMUB1Q9BVT8 246 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 PLA2G2FQ9BZM2 168 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 ASCL3Q9NQ33 180 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 PCOLCE2Q9UKZ9 415 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 CD160O95971 181 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 COL9A1P20849 921 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 CCDC144NLQ6NUI1 221 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 NPVFQ9HCQ7 196 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 SOX8P57073 446 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 LRRC75BQ2VPJ9 315 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 LDLRAD3Q86YD5 345 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 SGMS2Q8NHU3 365 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 NRIP2Q9BQI9 281 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 DIRC3C9JPN6 131 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 GABRA6Q16445 453 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 MAFAQ8NHW3 353 aaPredicted RBP11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 CT55Q8WUE5 264 aa11.55□□□□□ -0.56
CSPG4P11-201ENST00000560634 RPP25Q9BUL9 199 aaKnown RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms