RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 MPIG6BO95866 241 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 IGKV1D-33P01593 117 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 IGKV1-33P01594 117 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 CGB3P0DN86 165 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 CGB7P0DN87 165 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 ETV1P50549 477 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 DCTN2Q13561 401 aaKnown RBP10.01□□□□□ -0.81
SNX1-209ENST00000559961 Q499Y3 187 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 NHLRC3Q5JS37 347 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 C6orf183Q5T699 404 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 ZNF529Q6P280 563 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 TRAT1Q6PIZ9 186 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 Q6ZPA2 131 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 Q8NFD4 153 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 OR52M1Q8NGK5 317 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 OR2T10Q8NGZ9 312 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 CCDC107Q8WV48 283 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 GHSRQ92847 366 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 MRPS24Q96EL2 167 aaKnown RBP10.01□□□□□ -0.81
SNX1-209ENST00000559961 ZNF184Q99676 751 aaPredicted RBP10.01□□□□□ -0.81
SNX1-209ENST00000559961 RASL11BQ9BPW5 248 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 LINC00574Q9H8X3 128 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 AURKAIP1Q9NWT8 199 aaPredicted RBP10.01□□□□□ -0.81
SNX1-209ENST00000559961 KCNIP1Q9NZI2 227 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 GNG12Q9UBI6 72 aa10.01□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A18PA6NE21 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A16PA6NEW6 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A20PA6NIJ5 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A9PA6NNJ1 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A12PA8MX19 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A5PA8MXJ8 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 OGG1O15527 345 aa10□□□□□ -0.81
SNX1-209ENST00000559961 TXNL1O43396 289 aa10□□□□□ -0.81
SNX1-209ENST00000559961 RRP9O43818 475 aaKnown RBP10□□□□□ -0.81
SNX1-209ENST00000559961 ORC5O43913 435 aa10□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A15PP0C7V4 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A13PP0C7W8 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A14PP0C7W9 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 FAM90A24PP0C7X0 464 aa10□□□□□ -0.81
SNX1-209ENST00000559961 SSTR5P35346 364 aa10□□□□□ -0.81
SNX1-209ENST00000559961 SMN1Q16637 294 aaKnown RBP10□□□□□ -0.81
SNX1-209ENST00000559961 TMEM30BQ3MIR4 351 aa10□□□□□ -0.81
SNX1-209ENST00000559961 OR2G6Q5TZ20 316 aa10□□□□□ -0.81
SNX1-209ENST00000559961 ZNF329Q86UD4 541 aa10□□□□□ -0.81
SNX1-209ENST00000559961 DHRSXQ8N5I4 330 aa10□□□□□ -0.81
SNX1-209ENST00000559961 PLPPR1Q8TBJ4 325 aa10□□□□□ -0.81
SNX1-209ENST00000559961 NOTCH1P46531 2555 aa10□□□□□ -0.81
SNX1-209ENST00000559961 TRAV39A0A0B4J263 110 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 A0A1W2PPE3 182 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 EFCAB10A6NFE3 127 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 AP4M1O00189 453 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 MYL12BO14950 172 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 MAPK3P27361 379 aaPredicted RBP9.99□□□□□ -0.81
SNX1-209ENST00000559961 CAPGP40121 348 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 GP2P55259 537 aaKnown RBP9.99□□□□□ -0.81
SNX1-209ENST00000559961 ZNF816Q0VGE8 651 aaPredicted RBP9.99□□□□□ -0.81
SNX1-209ENST00000559961 LRRC36Q1X8D7 754 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 Q3ZCU0 254 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 AWAT2Q6E213 333 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 TEX38Q6PEX7 206 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 CDH26Q8IXH8 852 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 PACRGLQ8N7B6 248 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 C5orf56Q8N8D9 126 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 APH1BQ8WW43 257 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 VCXQ9H320 206 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 ETAA1Q9NY74 926 aa9.99□□□□□ -0.81
SNX1-209ENST00000559961 MRPS28Q9Y2Q9 187 aaKnown RBP9.99□□□□□ -0.81
SNX1-209ENST00000559961 IGHV1-3A0A0C4DH29 117 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 A0A1W2PPI3 338 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 CA11O75493 328 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 WBP4O75554 376 aaKnown RBP9.98□□□□□ -0.81
SNX1-209ENST00000559961 CRTAPO75718 401 aaPredicted RBP9.98□□□□□ -0.81
SNX1-209ENST00000559961 MOSP00540 346 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 MT-ND4P03905 459 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 AMY1AP04745 511 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 AMY2AP04746 511 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 MYCNOSP40205 109 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 REG1BP48304 166 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 RPL23AP62750 156 aaKnown RBP9.98□□□□□ -0.81
SNX1-209ENST00000559961 ST3GAL4Q11206 333 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 PNLIPRP3Q17RR3 467 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 TCTEX1D4Q5JR98 221 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 CXorf66Q5JRM2 361 aaPredicted RBP9.98□□□□□ -0.81
SNX1-209ENST00000559961 GLIPR1L1Q6UWM5 242 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 TGIF2LXQ8IUE1 241 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 C8orf59Q8N0T1 100 aaPredicted RBP9.98□□□□□ -0.81
SNX1-209ENST00000559961 PRR18Q8N4B5 295 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 LINC00311Q8N616 119 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 C8orf31Q8N9H6 132 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 OR8H1Q8NGG4 311 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 RGP1Q92546 391 aaPredicted RBP9.98□□□□□ -0.81
SNX1-209ENST00000559961 GFOD1Q9NXC2 390 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 ERGIC3Q9Y282 383 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 PEX16Q9Y5Y5 336 aa9.98□□□□□ -0.81
SNX1-209ENST00000559961 GPX5O75715 221 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 RGS11O94810 467 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 MAS1P04201 325 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 CD1BP29016 333 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 RAB25P57735 213 aa9.97□□□□□ -0.81
SNX1-209ENST00000559961 DOC2BQ14184 412 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms