RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 POC1AQ8NBT0 407 aa15.04■□□□□ -0
SNX1-208ENST00000559844 KIF25Q9UIL4 384 aa15.04■□□□□ -0
SNX1-208ENST00000559844 H0YL77 283 aa15.03■□□□□ -0
SNX1-208ENST00000559844 SH2D1BO14796 132 aa15.03■□□□□ -0
SNX1-208ENST00000559844 THBDP07204 575 aa15.03■□□□□ -0
SNX1-208ENST00000559844 GRPP07492 148 aa15.03■□□□□ -0
SNX1-208ENST00000559844 ATXN7L3Q14CW9 347 aaPredicted RBP15.03■□□□□ -0
SNX1-208ENST00000559844 ZNF146Q15072 292 aa15.03■□□□□ -0
SNX1-208ENST00000559844 PRSS54Q6PEW0 395 aa15.03■□□□□ -0
SNX1-208ENST00000559844 MOB1BQ7L9L4 216 aa15.03■□□□□ -0
SNX1-208ENST00000559844 DCUN1D4Q92564 292 aa15.03■□□□□ -0
SNX1-208ENST00000559844 OR10C1Q96KK4 312 aa15.03■□□□□ -0
SNX1-208ENST00000559844 TMEM165Q9HC07 324 aa15.03■□□□□ -0
SNX1-208ENST00000559844 ZNF205O95201 554 aa15.02■□□□□ -0
SNX1-208ENST00000559844 CLDN1O95832 211 aa15.02■□□□□ -0
SNX1-208ENST00000559844 SCTP09683 121 aa15.02■□□□□ -0
SNX1-208ENST00000559844 LYL1P12980 280 aa15.02■□□□□ -0
SNX1-208ENST00000559844 NAAAQ02083 359 aa15.02■□□□□ -0
SNX1-208ENST00000559844 TMEM187Q14656 261 aa15.02■□□□□ -0
SNX1-208ENST00000559844 PAN3Q58A45 887 aaKnown RBP15.02■□□□□ -0
SNX1-208ENST00000559844 C6orf183Q5T699 404 aa15.02■□□□□ -0
SNX1-208ENST00000559844 OR4A4PQ8NGN8 299 aa15.02■□□□□ -0
SNX1-208ENST00000559844 GLS2Q9UI32 602 aa15.02■□□□□ -0
SNX1-208ENST00000559844 PCDHB10Q9UN67 800 aa15.02■□□□□ -0
SNX1-208ENST00000559844 SPEF1Q9Y4P9 236 aa15.02■□□□□ -0
SNX1-208ENST00000559844 AUP1Q9Y679 476 aa15.02■□□□□ -0
SNX1-208ENST00000559844 CADP27708 2225 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 BET1O15155 118 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 MLNRO43193 412 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 OR2H2O95918 312 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 IGFBP2P18065 325 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 NUP62P37198 522 aaPredicted RBP15.02□□□□□ -0.01
SNX1-208ENST00000559844 ZNF83P51522 516 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 HLA-DRB3P79483 266 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 IL15RAQ13261 267 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 PHLDA2Q53GA4 152 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 RGS7BPQ6MZT1 257 aaPredicted RBP15.02□□□□□ -0.01
SNX1-208ENST00000559844 LRTM2Q8N967 370 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 ZNF565Q8N9K5 539 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 TLNRD1Q9H1K6 362 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 HES4Q9HCC6 221 aa15.02□□□□□ -0.01
SNX1-208ENST00000559844 PKDREJQ9NTG1 2253 aa15.01□□□□□ -0.01
SNX1-208ENST00000559844 TUSC2O75896 110 aa15.01□□□□□ -0.01
SNX1-208ENST00000559844 OR5AC1P0C628 307 aa15.01□□□□□ -0.01
SNX1-208ENST00000559844 FABP6P51161 128 aa15.01□□□□□ -0.01
SNX1-208ENST00000559844 RND3P61587 244 aa15.01□□□□□ -0.01
SNX1-208ENST00000559844 LIAT1Q6ZQX7 453 aa15.01□□□□□ -0.01
SNX1-208ENST00000559844 SSX8Q7RTT4 187 aa15.01□□□□□ -0.01
SNX1-208ENST00000559844 LGI3Q8N145 548 aa15.01□□□□□ -0.01
SNX1-208ENST00000559844 RNF126Q9BV68 326 aa15.01□□□□□ -0.01
SNX1-208ENST00000559844 FBXO9Q9UK97 447 aaPredicted RBP15.01□□□□□ -0.01
SNX1-208ENST00000559844 UTP20O75691 2785 aaKnown RBP15.01□□□□□ -0.01
SNX1-208ENST00000559844 USP9YO00507 2555 aaPredicted RBP15□□□□□ -0.01
SNX1-208ENST00000559844 MPTX1A8MV57 137 aa15□□□□□ -0.01
SNX1-208ENST00000559844 SLC33A1O00400 549 aaPredicted RBP15□□□□□ -0.01
SNX1-208ENST00000559844 SRPXP78539 464 aa15□□□□□ -0.01
SNX1-208ENST00000559844 HERPUD1Q15011 391 aa15□□□□□ -0.01
SNX1-208ENST00000559844 IAH1Q2TAA2 248 aaPredicted RBP15□□□□□ -0.01
SNX1-208ENST00000559844 ESCO2Q56NI9 601 aa15□□□□□ -0.01
SNX1-208ENST00000559844 DMRTC2Q8IXT2 367 aaPredicted RBP15□□□□□ -0.01
SNX1-208ENST00000559844 CITED4Q96RK1 184 aa15□□□□□ -0.01
SNX1-208ENST00000559844 ARPC5LQ9BPX5 153 aa15□□□□□ -0.01
SNX1-208ENST00000559844 A0A1B0GWJ7 208 aa15□□□□□ -0.01
SNX1-208ENST00000559844 LEUTXA8MZ59 168 aa15□□□□□ -0.01
SNX1-208ENST00000559844 M0R1B8 84 aa15□□□□□ -0.01
SNX1-208ENST00000559844 SIRPB1O00241 398 aa15□□□□□ -0.01
SNX1-208ENST00000559844 GGNBP1Q5YKI7 109 aa15□□□□□ -0.01
SNX1-208ENST00000559844 ALKAL2Q6UX46 152 aa15□□□□□ -0.01
SNX1-208ENST00000559844 MEX3BQ6ZN04 569 aaKnown RBP15□□□□□ -0.01
SNX1-208ENST00000559844 ST8SIA2Q92186 375 aa15□□□□□ -0.01
SNX1-208ENST00000559844 CABLES2Q9BTV7 478 aa15□□□□□ -0.01
SNX1-208ENST00000559844 GSKIPQ9P0R6 139 aa15□□□□□ -0.01
SNX1-208ENST00000559844 DNAJB11Q9UBS4 358 aa15□□□□□ -0.01
SNX1-208ENST00000559844 GPR31O00270 319 aa14.99□□□□□ -0.01
SNX1-208ENST00000559844 MPPED1O15442 326 aa14.99□□□□□ -0.01
SNX1-208ENST00000559844 SPDEFO95238 335 aa14.99□□□□□ -0.01
SNX1-208ENST00000559844 CRYAAP02489 173 aa14.99□□□□□ -0.01
SNX1-208ENST00000559844 KCNJ3P48549 501 aa14.99□□□□□ -0.01
SNX1-208ENST00000559844 RAB32Q13637 225 aa14.99□□□□□ -0.01
SNX1-208ENST00000559844 ZNF497Q6ZNH5 498 aa14.99□□□□□ -0.01
SNX1-208ENST00000559844 NGBQ9NPG2 151 aa14.99□□□□□ -0.01
SNX1-208ENST00000559844 H0YIZ8 118 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 PHF1O43189 567 aaPredicted RBP14.98□□□□□ -0.01
SNX1-208ENST00000559844 HAND1O96004 215 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 C20orf204Q6ZNR8 217 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 Q6ZR03 302 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 C11orf53Q8IXP5 236 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 GAPTQ8N292 157 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 MRPL24Q96A35 216 aaKnown RBP14.98□□□□□ -0.01
SNX1-208ENST00000559844 C18orf12Q96KH6 178 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 SLC5A7Q9GZV3 580 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 FZR1Q9UM11 496 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 IGKV1-6A0A0C4DH72 117 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 C3orf85A0A1B0GTC6 90 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 A6NLC8 198 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 NPIPB11E5RHQ5 1161 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 GNRHRP30968 328 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 SMCO1Q147U7 214 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 SP6Q3SY56 376 aa14.98□□□□□ -0.01
SNX1-208ENST00000559844 COMMD7Q86VX2 200 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms