RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 IGHV3-7P01780 117 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 GAPDHP04406 335 aaKnown RBP9.74□□□□□ -0.85
SPG11-219ENST00000559822 GTF2F2P13984 249 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 SERPINA2P20848 420 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 IL3RAP26951 378 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 SSTR5P35346 364 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 ZNF816Q0VGE8 651 aaPredicted RBP9.74□□□□□ -0.85
SPG11-219ENST00000559822 SMN1Q16637 294 aaKnown RBP9.74□□□□□ -0.85
SPG11-219ENST00000559822 TMEM30BQ3MIR4 351 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 YIF1BQ5BJH7 314 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 OR2G6Q5TZ20 316 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 TTC23Q5W5X9 447 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 XAF1Q6GPH4 301 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 FOXRED2Q8IWF2 684 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 C5orf56Q8N8D9 126 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 NEK7Q8TDX7 302 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 DPF1Q92782 380 aa9.74□□□□□ -0.85
SPG11-219ENST00000559822 SERPINE3A8MV23 424 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 CCRL2O00421 344 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 GEMIN2O14893 280 aaKnown RBP9.73□□□□□ -0.85
SPG11-219ENST00000559822 GPX5O75715 221 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 IGKV1D-33P01593 117 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 IGKV1-33P01594 117 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 TAS2R43P59537 309 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 Q3ZCU0 254 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 Q499Y3 187 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 SLC22A6Q4U2R8 563 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 UTF1Q5T230 341 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 ATAD3CQ5T2N8 411 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 SLC35E3Q7Z769 313 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 LINC00311Q8N616 119 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 C8orf31Q8N9H6 132 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 ARL11Q969Q4 196 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 MRPS24Q96EL2 167 aaKnown RBP9.73□□□□□ -0.85
SPG11-219ENST00000559822 TMEM80Q96HE8 168 aa9.73□□□□□ -0.85
SPG11-219ENST00000559822 ZNF184Q99676 751 aaPredicted RBP9.73□□□□□ -0.85
SPG11-219ENST00000559822 IGHV1-3A0A0C4DH29 117 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 TRBV5-5A0A0J9YX44 114 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 MCRIP1C9JLW8 97 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 SDCBPO00560 298 aaPredicted RBP9.72□□□□□ -0.85
SPG11-219ENST00000559822 SPINT2O43291 252 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 TXNL1O43396 289 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 ORC5O43913 435 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 IGFBP3P17936 291 aaPredicted RBP9.72□□□□□ -0.85
SPG11-219ENST00000559822 FSTP19883 344 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
SPG11-219ENST00000559822 EBI3Q14213 229 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 HNF4GQ14541 408 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 C6orf183Q5T699 404 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 DMKNQ6E0U4 476 aaPredicted RBP9.72□□□□□ -0.85
SPG11-219ENST00000559822 TRAT1Q6PIZ9 186 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 C10orf99Q6UWK7 81 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 MOB3BQ86TA1 216 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 ZNF329Q86UD4 541 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 CDH26Q8IXH8 852 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 IZUMO1Q8IYV9 350 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 PACRGLQ8N7B6 248 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 OR2T10Q8NGZ9 312 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 CYGBQ8WWM9 190 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 THRSPQ92748 146 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 GHSRQ92847 366 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 MCRIP2Q9BUT9 160 aaKnown RBP9.72□□□□□ -0.85
SPG11-219ENST00000559822 GON7Q9BXV9 100 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 ZFP57Q9NU63 452 aa9.72□□□□□ -0.85
SPG11-219ENST00000559822 TRAV39A0A0B4J263 110 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 NUDT19A8MXV4 375 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 C15orf65H3BRN8 121 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 AIPO00170 330 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 AP4M1O00189 453 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 MPIG6BO95866 241 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 IGHG2P01859 326 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 DIAPH2-AS1Q14236 149 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 ZNF497Q6ZNH5 498 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 TGIF2LXQ8IUE1 241 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 JAGN1Q8N5M9 183 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 LINC00482Q8N8I6 264 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 CCDC107Q8WV48 283 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 LIN7CQ9NUP9 197 aaKnown RBP9.71□□□□□ -0.86
SPG11-219ENST00000559822 GFOD1Q9NXC2 390 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 ZMAT5Q9UDW3 170 aaKnown RBP9.71□□□□□ -0.86
SPG11-219ENST00000559822 TRAPPC2LQ9UL33 140 aa9.71□□□□□ -0.86
SPG11-219ENST00000559822 MRPS28Q9Y2Q9 187 aaKnown RBP9.71□□□□□ -0.86
SPG11-219ENST00000559822 SIRT4Q9Y6E7 314 aaPredicted RBP9.71□□□□□ -0.86
SPG11-219ENST00000559822 A0A1W2PPE3 182 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 FAM90A10PA6NDY2 464 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 EFCAB10A6NFE3 127 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 FAM90A7PA6NKC0 464 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 NCBP2LA6PVI3 153 aaKnown RBP9.7□□□□□ -0.86
SPG11-219ENST00000559822 FAM90A23PA8MXZ1 464 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 CA11O75493 328 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 LALBAP00709 142 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 MT-ND4P03905 459 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 CD1BP29016 333 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 DCTN2Q13561 401 aaKnown RBP9.7□□□□□ -0.86
SPG11-219ENST00000559822 AWAT2Q6E213 333 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 TEX38Q6PEX7 206 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 GLIPR1L1Q6UWM5 242 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 OR2W3Q7Z3T1 314 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 STPG2Q8N412 459 aa9.7□□□□□ -0.86
SPG11-219ENST00000559822 DHRSXQ8N5I4 330 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms