RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 CD1BP29016 333 aa12.67□□□□□ -0.38
CDC42BPB-205ENST00000559245 ALKBH1Q13686 389 aaKnown RBP12.67□□□□□ -0.38
CDC42BPB-205ENST00000559245 SERPINA12Q8IW75 414 aa12.67□□□□□ -0.38
CDC42BPB-205ENST00000559245 LINC00311Q8N616 119 aa12.67□□□□□ -0.38
CDC42BPB-205ENST00000559245 TMEM104Q8NE00 496 aa12.67□□□□□ -0.38
CDC42BPB-205ENST00000559245 PXT1Q8NFP0 134 aa12.67□□□□□ -0.38
CDC42BPB-205ENST00000559245 OR5D14Q8NGL3 314 aa12.67□□□□□ -0.38
CDC42BPB-205ENST00000559245 PELI1Q96FA3 418 aa12.67□□□□□ -0.38
CDC42BPB-205ENST00000559245 ERICH4A6NGS2 130 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 J3QLW9 94 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 J3QRE1 110 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 ZNF19P17023 458 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 SOX6P35712 828 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 PIGYQ3MUY2 71 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 LPCAT4Q643R3 524 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 FAM71E2Q8N5Q1 922 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 OR10K1Q8NGX5 313 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 RTN4IP1Q8WWV3 396 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 ST6GALNAC6Q969X2 333 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 C4orf36Q96KX1 117 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 KCTD7Q96MP8 289 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 DPCDQ9BVM2 203 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 GABARAPL3Q9BY60 117 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 RIBC2Q9H4K1 309 aa12.66□□□□□ -0.38
CDC42BPB-205ENST00000559245 LCE6AA0A183 80 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 ZNF736B4DX44 427 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 SDCBPO00560 298 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 OR8U8P0C7N1 319 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 GZMHP20718 246 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 FASP25445 335 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 IL3RAP26951 378 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 FAM27D1Q5T7N8 215 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 ASPHD1Q5U4P2 390 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 OVCH2Q7RTZ1 564 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 AMIGO2Q86SJ2 522 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 PARP16Q8N5Y8 322 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 SUMF2Q8NBJ7 301 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 OR8H1Q8NGG4 311 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 OR52M1Q8NGK5 317 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 OR1N2Q8NGR9 330 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 UBALD1Q8TB05 177 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 MYOZ3Q8TDC0 251 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 TNFAIP8L1Q8WVP5 186 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 ARL11Q969Q4 196 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 RNFT2Q96EX2 444 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 GPER1Q99527 375 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 GNB4Q9HAV0 340 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 PALMDQ9NP74 551 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 ZNF581Q9P0T4 197 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 ZNF580Q9UK33 172 aa12.65□□□□□ -0.38
CDC42BPB-205ENST00000559245 C15orf65H3BRN8 121 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 GABRPO00591 440 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 IGF1P05019 195 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 F2RL1P55085 397 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZNF616Q08AN1 781 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 RSU1Q15404 277 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 FAM53AQ6NSI3 398 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZNF429Q86V71 674 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 SATL1Q86VE3 508 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 C8orf31Q8N9H6 132 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 RBMXL1Q96E39 390 aaKnown RBP12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 CPNE2Q96FN4 548 aaPredicted RBP12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 GFOD1Q9NXC2 390 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 STARD9Q9P2P6 4700 aa12.64□□□□□ -0.39
CDC42BPB-205ENST00000559245 BIRC6Q9NR09 4857 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 IGHV3-43A0A0B4J1X8 118 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 TMEM30CPA0ZSE6 113 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 I3L521 148 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 HTR3BO95264 441 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 FRMD6-AS1P0C7T7 363 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 OR5H8P0DN80 308 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 IGHV3-43DP0DP04 118 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 DOC2BQ14184 412 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 TMEM65Q6PI78 240 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 ACBD7Q8N6N7 88 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZNF491Q8N8L2 437 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 FAM192AQ9GZU8 254 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 KLK15Q9H2R5 256 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZMAT4Q9H898 229 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 ISYNA1Q9NPH2 558 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 IMPAD1Q9NX62 359 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 ZNF107Q9UII5 783 aaPredicted RBP12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 DHDHQ9UQ10 334 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 ST3GAL6Q9Y274 331 aa12.63□□□□□ -0.39
CDC42BPB-205ENST00000559245 MAGEB3O15480 346 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 TXNL1O43396 289 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 OR7C1O76099 320 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 RAB3AP20336 220 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 PPIFP30405 207 aaKnown RBP12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 GNB1P62873 340 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 RUNX1Q01196 453 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 KIAA0141Q14154 515 aaPredicted RBP12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 ASCL4Q6XD76 172 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 OR51A2Q8NGJ7 313 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 CCDC107Q8WV48 283 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 TSEN15Q8WW01 171 aaKnown RBP12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 TRUB1Q8WWH5 349 aaKnown RBP12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 DCUN1D4Q92564 292 aa12.62□□□□□ -0.39
CDC42BPB-205ENST00000559245 OR5B12Q96R08 314 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms