RNA–Protein interactions for RNA: ENST00000558253.5

SPG11-209, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 879 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-209ENST00000558253 PRR13Q9NZ81 148 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 COQ3Q9NZJ6 369 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 SPRR3Q9UBC9 169 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 PRSS50Q9UI38 385 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 WIPI2Q9Y4P8 454 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 KPTNQ9Y664 436 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 R4GN57 208 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 TECTAO75443 2155 aa7.09□□□□□ -1.27
SPG11-209ENST00000558253 SPTBN5Q9NRC6 3674 aaKnown RBP7.08□□□□□ -1.28
SPG11-209ENST00000558253 TNRC6AQ8NDV7 1962 aaKnown RBP7.08□□□□□ -1.28
SPG11-209ENST00000558253 FAM221AA4D161 298 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 ZNF503-AS2A6NEH8 195 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 ZNF891A8MT65 544 aaPredicted RBP7.08□□□□□ -1.28
SPG11-209ENST00000558253 PRR33A8MZF0 331 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 RNASEK-C17orf49H0YIS7 233 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.08□□□□□ -1.28
SPG11-209ENST00000558253 SYNGR1O43759 233 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 SMPD2O60906 423 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 PITX3O75364 302 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 FBXO24O75426 580 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 DFFBO76075 338 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 SCAF4O95104 1147 aaKnown RBP7.08□□□□□ -1.28
SPG11-209ENST00000558253 SCGB1D2O95969 90 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 CD5P06127 495 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 SERPINE2P07093 398 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 SCTP09683 121 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 COX5AP20674 150 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 F2RP25116 425 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 S100PP25815 95 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 AKR1D1P51857 326 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 ERVK11-1P61568 191 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 TGIF1Q15583 401 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 MST1LQ2TV78 715 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 C3orf36Q3SXR2 165 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 SP6Q3SY56 376 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 HIKESHIQ53FT3 197 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 IGSF11Q5DX21 431 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 Q6P435 159 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 TRAT1Q6PIZ9 186 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 ZNF600Q6ZNG1 722 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 ZNF497Q6ZNH5 498 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 FOXRED2Q8IWF2 684 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 SLC35G3Q8N808 338 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 SUMF1Q8NBK3 374 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 SECTM1Q8WVN6 248 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 LSM10Q969L4 123 aaKnown RBP7.08□□□□□ -1.28
SPG11-209ENST00000558253 RAB40CQ96S21 281 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 TP53RKQ96S44 253 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 NRIP2Q9BQI9 281 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 C1QTNF6Q9BXI9 259 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 FGF23Q9GZV9 251 aaPredicted RBP7.08□□□□□ -1.28
SPG11-209ENST00000558253 HIPK2Q9H2X6 1198 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 C12orf49Q9H741 205 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 TREM1Q9NP99 234 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 PLSCR4Q9NRQ2 329 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 DLL3Q9NYJ7 618 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 KCNIP1Q9NZI2 227 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 SDK2Q58EX2 2172 aa7.08□□□□□ -1.28
SPG11-209ENST00000558253 TRAV24A0A0B4J272 114 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 NKX2-6A6NCS4 301 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 FAM90A26D6RGX4 464 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 IFNL4K9M1U5 179 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 KCNAB3O43448 404 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 PGLYRP1O75594 196 aaPredicted RBP7.07□□□□□ -1.28
SPG11-209ENST00000558253 CEACAM4O75871 244 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 LY86O95711 162 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 TSPAN15O95858 294 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 HEXAP06865 529 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 FTH1P19P0C7X4 201 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 PGA5P0DJD9 388 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 CCL2P13500 99 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 KITLGP21583 273 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 IGHV1-2P23083 117 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 CA6P23280 308 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 LMO1P25800 156 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 PAX6P26367 422 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 FOXG1P55316 489 aaPredicted RBP7.07□□□□□ -1.28
SPG11-209ENST00000558253 TAS2R30P59541 319 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 RAB2AP61019 212 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 PAX5Q02548 391 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 GUCA2BQ16661 112 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 NMSQ5H8A3 153 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 ZNF324BQ6AW86 544 aaPredicted RBP7.07□□□□□ -1.28
SPG11-209ENST00000558253 OR2T2Q6IF00 324 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 PCSK4Q6UW60 755 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 DMBX1Q8NFW5 382 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 OR10V1Q8NGI7 309 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 DYRK2Q92630 601 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 TOLLIPQ9H0E2 274 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 CXXC4Q9H2H0 198 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 HRH4Q9H3N8 390 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 C11orf1Q9H5F2 150 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 UNKLQ9H9P5 680 aaKnown RBP7.07□□□□□ -1.28
SPG11-209ENST00000558253 HES4Q9HCC6 221 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 LYRM2Q9NU23 88 aaPredicted RBP7.07□□□□□ -1.28
SPG11-209ENST00000558253 MBNL3Q9NUK0 354 aaKnown RBP7.07□□□□□ -1.28
SPG11-209ENST00000558253 LIN7CQ9NUP9 197 aaKnown RBP7.07□□□□□ -1.28
SPG11-209ENST00000558253 ZNF581Q9P0T4 197 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 TAAR3PQ9P1P4 343 aa7.07□□□□□ -1.28
SPG11-209ENST00000558253 CACFD1Q9UGQ2 172 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms