RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 HS3ST2Q9Y278 367 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 WIF1Q9Y5W5 379 aa3.29□□□□□ -1.88
GPHN-215ENST00000557654 FRMPD3Q5JV73 1810 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 COL4A6Q14031 1691 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 NPIPA5A0A0B4J1W7 369 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 A0A1B0GW64 132 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 A0A1W2PPE3 182 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 A0A1W2PRV1 198 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 OR2AG2A6NM03 316 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 NPIPA5E9PKD4 350 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 MKRN2OSH3BPM6 223 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 RPL36A-HNRNPH2H7BZ11 118 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 TAAR5O14804 337 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 ARPC3O15145 178 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 ZNF208O43345 1280 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 CDC40O60508 579 aaKnown RBP eCLIP3.28□□□□□ -1.88
GPHN-215ENST00000557654 MTX2O75431 263 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 UPK3AO75631 287 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 CTAG2O75638 210 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 CXCL14O95715 111 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 RAB3DO95716 219 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 F10P00742 488 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 IFNA17P01571 189 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 CD3DP04234 171 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 GAPDHP04406 335 aaKnown RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 CD2P06729 351 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 DBIP07108 87 aaKnown RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 TACSTD2P09758 323 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 SFTA3P0C7M3 94 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 HIST1H1BP16401 226 aaKnown RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 ZNF14P17017 642 aaPredicted RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 CSNK2A2P19784 350 aaPredicted RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 TBPP20226 339 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 IGHV1-2P23083 117 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 PSMB6P28072 239 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 MPIP34949 423 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 OR3A4PP47883 348 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 CX3CR1P49238 355 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 SULT1A2P50226 295 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 PPT1P50897 306 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 NCBP2P52298 156 aaKnown RBP eCLIP3.28□□□□□ -1.88
GPHN-215ENST00000557654 PKIAP61925 76 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 SLC7A9P82251 487 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 LASP1Q14847 261 aaKnown RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 RHEBQ15382 184 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 SGCAQ16586 387 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 ARHGAP11BQ3KRB8 267 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 CLLU1OSQ5K130 101 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 OR52W1Q6IF63 320 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 SLC8B1Q6J4K2 584 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 SLC48A1Q6P1K1 146 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 TMEM220Q6QAJ8 160 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 WDR88Q6ZMY6 472 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 ZNF836Q6ZNA1 936 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 HIST2H3AQ71DI3 136 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 SSX9Q7RTT3 188 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 OLIG3Q7RTU3 272 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 DCXRQ7Z4W1 244 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 HSD11B1LQ7Z5J1 315 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 ARRDC1Q8N5I2 433 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 ZNF433Q8N7K0 673 aaPredicted RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 ZNF565Q8N9K5 539 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 ACOT4Q8N9L9 421 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 OR4K17Q8NGC6 315 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 OR13C8Q8NGS7 320 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 OR13C2Q8NGS9 318 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 OR9A4Q8NGU2 314 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 PAQR8Q8TEZ7 354 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 KLK6Q92876 244 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 PTX4Q96A99 478 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 SEH1LQ96EE3 360 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 C14orf144Q96I85 54 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 YPEL4Q96NS1 127 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 CLCC1Q96S66 551 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 S100A13Q99584 98 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 PHB2Q99623 299 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 PRRT1Q99946 306 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 PDCD1LG2Q9BQ51 273 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 RNF126Q9BV68 326 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 TM2D1Q9BX74 207 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 CHST5Q9GZS9 411 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 SMDT1Q9H4I9 107 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 XKR8Q9H6D3 395 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 MRPS30Q9NP92 439 aaKnown RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 CHRNA9Q9UGM1 479 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 ZNF230Q9UIE0 474 aaPredicted RBP3.28□□□□□ -1.88
GPHN-215ENST00000557654 CES1P1Q9UKY3 287 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 TP53TG5Q9Y2B4 290 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 STARD10Q9Y365 291 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 MED31Q9Y3C7 131 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 OR10H1Q9Y4A9 318 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 FLVCR1Q9Y5Y0 555 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 KCNE3Q9Y6H6 103 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 ANAPC1Q9H1A4 1944 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 PLXNA2O75051 1894 aa3.28□□□□□ -1.88
GPHN-215ENST00000557654 NUP214P35658 2090 aaPredicted RBP3.28□□□□□ -1.89
GPHN-215ENST00000557654 HELZP42694 1942 aaKnown RBP3.27□□□□□ -1.89
GPHN-215ENST00000557654 THSD7BQ9C0I4 1608 aa3.27□□□□□ -1.89
GPHN-215ENST00000557654 NUP210Q8TEM1 1887 aaPredicted RBP3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms