RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 TRAF3IP2O43734 574 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF861PO60384 105 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 HPGDSO60760 199 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 NPIPB7O75200 414 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ZMPSTE24O75844 475 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SNAPC5O75971 98 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 OR2J2O76002 312 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 VAPBO95292 243 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 IGF2P01344 180 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 IGLV1-47P01700 117 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 RHOCP08134 193 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 RPS3P23396 243 aaKnown RBP eCLIP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 CD1CP29017 333 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 RORCP51449 518 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 CCR8P51685 355 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 NDUFA8P51970 172 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 KLF3P57682 345 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 MLF1P58340 268 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 TAS2R19P59542 299 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SNRPD2P62316 118 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 RPS21P63220 83 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 RPL19P84098 196 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 PRKCDQ05655 676 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 PSG7Q13046 419 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 DAZ2Q13117 558 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ELOCQ15369 112 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 PSG3Q16557 428 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 NRF1Q16656 503 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ATP6V1FQ16864 119 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SPANXN2Q5MJ10 180 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 GPR157Q5UAW9 335 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 PLCXD3Q63HM9 321 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 LAMTOR1Q6IAA8 161 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF773Q6PK81 442 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF836Q6ZNA1 936 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 FAM183BPQ6ZVS7 135 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ABHD13Q7L211 337 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SSX7Q7RTT5 188 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 TMEM135Q86UB9 458 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF546Q86UE3 836 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 NAA40Q86UY6 237 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 GKN2Q86XP6 184 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 RBM45Q8IUH3 476 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SNX29P2Q8IUI4 249 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 WDFY1Q8IWB7 410 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 PUSL1Q8N0Z8 303 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SLC25A45Q8N413 288 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 PNKDQ8N490 385 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 YIPF7Q8N8F6 280 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 CYB561A3Q8NBI2 242 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 HSD17B11Q8NBQ5 300 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 OR2M7Q8NG81 312 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 OR11L1Q8NGX0 322 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 TERB2Q8NHR7 220 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 CXorf40AQ8TE69 158 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ACOT11Q8WXI4 607 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 TMEM234Q8WY98 164 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 HGDQ93099 445 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SLC38A4Q969I6 547 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 DNAJC19Q96DA6 116 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 CPNE2Q96FN4 548 aaPredicted RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF382Q96SR6 550 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 PHB2Q99623 299 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ZNF426Q9BUY5 554 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 HINT2Q9BX68 163 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 NAA50Q9GZZ1 169 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 AUNIPQ9H7T9 357 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SLC25A22Q9H936 323 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 RNF122Q9H9V4 155 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 CACYBPQ9HB71 228 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 DAZ3Q9NR90 486 aaKnown RBP3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SLC17A7Q9P2U7 560 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 LGALS13Q9UHV8 139 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 CELA1Q9UNI1 258 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 ING4Q9UNL4 249 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 SLC22A13Q9Y226 551 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 RHBDD3Q9Y3P4 386 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 MYOFQ9NZM1 2061 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 MYH10P35580 1976 aa3.16□□□□□ -1.9
PRPF39-212ENST00000557477 LRRK1Q38SD2 2015 aa3.15□□□□□ -1.9
PRPF39-212ENST00000557477 KLRC4-KLRK1H3BQV0 150 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 PDCD5O14737 125 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 TCF21O43680 179 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 MRPS14O60783 128 aaKnown RBP3.15□□□□□ -1.91
PRPF39-212ENST00000557477 PIAS1O75925 651 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 GABARAPO95166 117 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 C6orf47O95873 294 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 SERPINA1P01009 418 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 APOC3P02656 99 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 C8GP07360 202 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 GABRA1P14867 456 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 HLA-GP17693 338 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 PGAM1P18669 254 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 CD82P27701 267 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 HTR1EP28566 365 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 S100A2P29034 98 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 SLC6A1P30531 599 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 DRD3P35462 400 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 CD200P41217 278 aa3.15□□□□□ -1.91
PRPF39-212ENST00000557477 MAGEA3P43357 314 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms