RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 TRDV1A0A1B0GX56 115 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 DPPA5A6NC42 116 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 VGLL3A8MV65 326 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 PIN1P1O15428 100 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 CA11O75493 328 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 IL1AP01583 271 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 GLAP06280 429 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 UCHL1P09936 223 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 MNDAP41218 407 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 PLA1AQ53H76 456 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 RSBN1Q5VWQ0 802 aaPredicted RBP11.2□□□□□ -0.62
VPS33B-206ENST00000557358 C11orf88Q6PI97 169 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 TMEM91Q6ZNR0 172 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 SLC16A12Q6ZSM3 486 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 LHFPL4Q7Z7J7 247 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 KCNG3Q8TAE7 436 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 MRGPRDQ8TDS7 321 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 C17orf50Q8WW18 174 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 AKR1E2Q96JD6 320 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 NEDD4LQ96PU5 975 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 NAA50Q9GZZ1 169 aaKnown RBP11.2□□□□□ -0.62
VPS33B-206ENST00000557358 PLGRKTQ9HBL7 147 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 ETAA1Q9NY74 926 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 IDI2-AS1Q9NZ38 188 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 NDUFA13Q9P0J0 144 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 HILPDAQ9Y5L2 63 aa11.2□□□□□ -0.62
VPS33B-206ENST00000557358 CCDC160A6NGH7 325 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 AIPO00170 330 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 FUT3P21217 361 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 HTR2CP28335 458 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 CD34P28906 385 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 TMBIM6P55061 237 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 INSL4Q14641 139 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 ARSJQ5FYB0 599 aaPredicted RBP11.19□□□□□ -0.62
VPS33B-206ENST00000557358 C6orf183Q5T699 404 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 RAB12Q6IQ22 244 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 TRAT1Q6PIZ9 186 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 BRICD5Q6PL45 260 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 OR6M1Q8NGM8 313 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 OR9G1Q8NH87 305 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 OR2T6Q8NHC8 308 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 RAB2BQ8WUD1 216 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 RPEQ96AT9 228 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 BCL7BQ9BQE9 202 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 TMEM59Q9BXS4 323 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 RBM38Q9H0Z9 239 aaKnown RBP11.19□□□□□ -0.62
VPS33B-206ENST00000557358 BANF2Q9H503 90 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 RANBP3Q9H6Z4 567 aaPredicted RBP11.19□□□□□ -0.62
VPS33B-206ENST00000557358 TXNL4BQ9NX01 149 aaKnown RBP11.19□□□□□ -0.62
VPS33B-206ENST00000557358 TRAPPC2LQ9UL33 140 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 PEX16Q9Y5Y5 336 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 CEPT1Q9Y6K0 416 aa11.19□□□□□ -0.62
VPS33B-206ENST00000557358 OOSP1A8MZH6 123 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 PDCD5O14737 125 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 SPINT2O43291 252 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 TSPAN9O75954 239 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 BPNT1O95861 308 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 MPIG6BO95866 241 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 MYL9P24844 172 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 FGF9P31371 208 aaPredicted RBP11.18□□□□□ -0.62
VPS33B-206ENST00000557358 DYNLT3P51808 116 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 LTC4SQ16873 150 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 TMEM30BQ3MIR4 351 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 FAM27D1Q5T7N8 215 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 C22orf42Q6IC83 251 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 OR13A1Q8NGR1 328 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 PLPPR1Q8TBJ4 325 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 ARL11Q969Q4 196 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 FAM46BQ96A09 425 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 ISOC1Q96CN7 298 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 KIRREL1Q96J84 757 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 URM1Q9BTM9 101 aaKnown RBP11.18□□□□□ -0.62
VPS33B-206ENST00000557358 CENPOQ9BU64 300 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 C16orf95Q9H693 158 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 KCNIP1Q9NZI2 227 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 TCF19Q9Y242 345 aa11.18□□□□□ -0.62
VPS33B-206ENST00000557358 A0A087X0M5 115 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 A0A1B0GX30 115 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 A0A1W2PP11 408 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 FAM172BPA6NC97 362 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 ORC5O43913 435 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 PDCD6O75340 191 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 PEX14O75381 377 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 MMP23AO75900 390 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 LPLP06858 475 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 IL3RAP26951 378 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 CALRP27797 417 aaKnown RBP11.17□□□□□ -0.62
VPS33B-206ENST00000557358 LSM3P62310 102 aaKnown RBP11.17□□□□□ -0.62
VPS33B-206ENST00000557358 RELBQ01201 579 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 CTF1Q16619 201 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 C17orf58Q2M2W7 97 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 HLA-DRB5Q30154 266 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 C1orf100Q5SVJ3 147 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 Q6ZSV7 163 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 LRRTM1Q86UE6 522 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 OR4P4Q8NGL7 312 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 OR10X1Q8NGY0 326 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 LINC01006Q8NI28 216 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 RFESDQ8TAC1 157 aa11.17□□□□□ -0.62
VPS33B-206ENST00000557358 Q96M66 194 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms