RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 ATP6AP1LQ52LC2 224 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 RFTN2Q52LD8 501 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 C5orf47Q569G3 176 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 KLF17Q5JT82 389 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 VAX1Q5SQQ9 334 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 EIF5AL1Q6IS14 154 aaKnown RBP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF562Q6V9R5 426 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 TIFABQ6ZNK6 161 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF788Q6ZQV5 615 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 C9orf139Q6ZV77 190 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 AHSA2Q719I0 299 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 KCTD9Q7L273 389 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 C6orf120Q7Z4R8 191 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 C11orf42Q8N5U0 333 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CLDN22Q8N7P3 220 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 CSNK2A3Q8NEV1 391 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 PXT1Q8NFP0 134 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 OR5D16Q8NGK9 328 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 OR13C5Q8NGS8 318 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 OR10A6Q8NH74 314 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 SFXN5Q8TD22 340 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 ORAOV1Q8WV07 137 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 ASB17Q8WXJ9 295 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 DDB2Q92466 427 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 TOMM40LQ969M1 308 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 LGALS12Q96DT0 336 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 C3orf30Q96M34 536 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 OR2V2Q96R30 315 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 ABHD1Q96SE0 405 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 S100A13Q99584 98 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 EGLN1Q9GZT9 426 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF350Q9GZX5 532 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 ISYNA1Q9NPH2 558 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 TRIM36Q9NQ86 728 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 MMP26Q9NRE1 261 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 SERTAD4Q9NUC0 356 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 TAAR3PQ9P1P4 343 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 SAMD4AQ9UPU9 718 aaKnown RBP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 RCE1Q9Y256 329 aa4.07□□□□□ -1.76
ATXN3-247ENST00000557311 UBE2J1Q9Y385 318 aaPredicted RBP4.07□□□□□ -1.76
ATXN3-247ENST00000557311 FAM240BA0A1B0GVZ2 78 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 SMCO3A2RU48 225 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 A8MVM7 634 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 F8WDY8 70 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 H0YIZ8 118 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 TRAPPC2LH3BP13 241 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 M0R036 132 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 SOCS2O14508 198 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 PROP1O75360 226 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 DFFBO76075 338 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 RAB36O95755 333 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 HPRP00739 348 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 IFNA5P01569 189 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 HLA-HP01893 362 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 ARG1P05089 322 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 CD5P06127 495 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 BPGMP07738 259 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 CHRM4P08173 479 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 IL6RP08887 468 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-247ENST00000557311 UCHL1P09936 223 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 PPIAL4GP0DN37 164 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 CD79AP11912 226 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF43P17038 809 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 HTR2AP28223 471 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 S100GP29377 79 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 POLR2IP36954 125 aaKnown RBP4.06□□□□□ -1.76
ATXN3-247ENST00000557311 GPR12P47775 334 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 RAG2P55895 527 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 CLDN17P56750 224 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 PAX8Q06710 450 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 AESQ08117 197 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 C1DQ13901 141 aaKnown RBP4.06□□□□□ -1.76
ATXN3-247ENST00000557311 CEACAM16Q2WEN9 425 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 LGALSLQ3ZCW2 172 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-247ENST00000557311 CYBRD1Q53TN4 286 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 COL5A1-AS1Q5SY13 56 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 KPRPQ5T749 579 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF691Q5VV52 312 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 DNM1P34Q6PK57 102 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 SMARCD3Q6STE5 483 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF620Q6ZNG0 422 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 OLIG3Q7RTU3 272 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF546Q86UE3 836 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 CBLN2Q8IUK8 224 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 SERPINA12Q8IW75 414 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 NHLRC2Q8NBF2 726 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 ZNF555Q8NEP9 628 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 PROKR2Q8NFJ6 384 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 OR4C5Q8NGB2 326 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 OR52E2Q8NGJ4 325 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 OR10D4PQ8NGN7 298 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 OR2T11Q8NH01 316 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 FAM110DQ8TAY7 271 aaPredicted RBP4.06□□□□□ -1.76
ATXN3-247ENST00000557311 SYNPRQ8TBG9 265 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 CCL17Q92583 94 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 CNOT9Q92600 299 aaKnown RBP4.06□□□□□ -1.76
ATXN3-247ENST00000557311 FCGR1BQ92637 280 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 FAM46BQ96A09 425 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 COQ8BQ96D53 544 aa4.06□□□□□ -1.76
ATXN3-247ENST00000557311 ASB9Q96DX5 294 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms