RNA–Protein interactions for RNA: ENST00000556237.1

HIF1A-208, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 4

Gene HIF1A, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-208ENST00000556237 PPA2Q9H2U2 334 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 SAP30LQ9HAJ7 183 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 SEBOXQ9HB31 216 aaPredicted RBP5.3□□□□□ -1.56
HIF1A-208ENST00000556237 BEX1Q9HBH7 125 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 ZNF286AQ9HBT8 521 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 TMEM165Q9HC07 324 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 Q9N2K0 584 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 C12orf4Q9NQ89 552 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 CBLN4Q9NTU7 201 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 EHFQ9NZC4 300 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 C11orf21Q9P2W6 132 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 ANXA10Q9UJ72 324 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 TRAPPC2LQ9UL33 140 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 FLVCR2Q9UPI3 526 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 NPTNQ9Y639 398 aa5.3□□□□□ -1.56
HIF1A-208ENST00000556237 NBASA2RRP1 2371 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 PKD1L2Q7Z442 2459 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 IGKV1D-17A0A075B6S4 117 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 PPIAL4EA0A075B759 164 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 A6NNC1 897 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 TRDCB7Z8K6 153 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 PPIAL4DF5H284 164 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 TMEM178BH3BS89 294 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 H7C1Q1 480 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 LGALS8O00214 317 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 ARPC1BO15143 372 aaKnown RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 NDUFB6O95139 128 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 NAPSAO96009 420 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 CD8AP01732 235 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 GYPAP02724 150 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 RLN1P04808 185 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 SCTP09683 121 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 RNF224P0DH78 156 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 PPIAL4FP0DN26 164 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 IGFBP2P18065 325 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 COL8A2P25067 703 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 MDH2P40926 338 aaKnown RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 SEC61A1P61619 476 aaKnown RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 AESQ08117 197 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 FOXE3Q13461 319 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 RBMS2Q15434 407 aaKnown RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 SRSF7Q16629 238 aaKnown RBP eCLIP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 VAX1Q5SQQ9 334 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 SHEQ5VZ18 495 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 SP5Q6BEB4 398 aaPredicted RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 SLC35E4Q6ICL7 350 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 IDO2Q6ZQW0 420 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 OVCH2Q7RTZ1 564 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 C5orf24Q7Z6I8 188 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 C1orf87Q8N0U7 546 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 CADM3Q8N126 398 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 ASCC1Q8N9N2 400 aaKnown RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 OR6F1Q8NGZ6 308 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 TERB2Q8NHR7 220 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 PLPPR1Q8TBJ4 325 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 MRPL30Q8TCC3 161 aaKnown RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 UPRTQ96BW1 309 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 SNX22Q96L94 193 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 CCL13Q99616 98 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 PRRT1Q99946 306 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 UBTD1Q9HAC8 227 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 TMEM106BQ9NUM4 274 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 NUDT15Q9NV35 164 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 DCAF16Q9NXF7 216 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 FBXO9Q9UK97 447 aaPredicted RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 PPIAL4AQ9Y536 164 aa5.29□□□□□ -1.56
HIF1A-208ENST00000556237 KLF2Q9Y5W3 355 aaPredicted RBP5.29□□□□□ -1.56
HIF1A-208ENST00000556237 CHD3Q12873 2000 aaKnown RBP5.28□□□□□ -1.56
HIF1A-208ENST00000556237 MEIKINA0A087WXM9 373 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 TRBV6-6A0A0A6YYG2 114 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 TRAV39A0A0B4J263 110 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 TRAV38-1A0A0B4J264 116 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 IGHV1-69-2A0A0G2JMI3 117 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 KIR2DS1A0A191URI9 304 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 A0A1W2PPR1 153 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 TMEM30CPA0ZSE6 113 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 OOEPA6NGQ2 149 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 LYNX1G3V0Z9 82 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 FABP7O15540 132 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 LY86O95711 162 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 SOD3P08294 240 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 CTXN2P0C2S0 81 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 DANCRP0C864 163 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 OR5H8P0DN80 308 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 LYNX1P0DP58 116 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 MUC1P15941 1255 aaPredicted RBP5.28□□□□□ -1.56
HIF1A-208ENST00000556237 RCC1P18754 421 aaPredicted RBP5.28□□□□□ -1.56
HIF1A-208ENST00000556237 ANXA7P20073 488 aaKnown RBP5.28□□□□□ -1.56
HIF1A-208ENST00000556237 KIR2DS4P43632 304 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 KCNJ3P48549 501 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 PPOXP50336 477 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 RAG2P55895 527 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 LGALS4P56470 323 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 SRSF1Q07955 248 aaKnown RBP eCLIP5.28□□□□□ -1.56
HIF1A-208ENST00000556237 KIR2DS1Q14954 304 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 ATXN7L3Q14CW9 347 aaPredicted RBP5.28□□□□□ -1.56
HIF1A-208ENST00000556237 TATDN3Q17R31 274 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 HFEQ30201 348 aa5.28□□□□□ -1.56
HIF1A-208ENST00000556237 IGSF11Q5DX21 431 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms