RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 GEMIN2O14893 280 aaKnown RBP17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 OGG1O15527 345 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 IGKV1D-33P01593 117 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 IGKV1-33P01594 117 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 GTF2F2P13984 249 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 ZNF816Q0VGE8 651 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 YIF1BQ5BJH7 314 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 ATAD3CQ5T2N8 411 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 C10orf99Q6UWK7 81 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 NEK7Q8TDX7 302 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 ZNF184Q99676 751 aaPredicted RBP17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 SPACA1Q9HBV2 294 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 RAB9BQ9NP90 201 aa17.12■□□□□ 0.33
SDR39U1-216ENST00000556175 TRAV39A0A0B4J263 110 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 SERPINE3A8MV23 424 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 CCRL2O00421 344 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 ORC5O43913 435 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 GAPDHP04406 335 aaKnown RBP17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 IL3RAP26951 378 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 SLC6A1P30531 599 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 SLC35B1P78383 322 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 DIAPH2-AS1Q14236 149 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 Q499Y3 187 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 TTC23Q5W5X9 447 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 FOXRED2Q8IWF2 684 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 STX19Q8N4C7 294 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 C8orf31Q8N9H6 132 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 SETD9Q8NE22 299 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 GHSRQ92847 366 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 ARL11Q969Q4 196 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 TMEM80Q96HE8 168 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 C8orf4Q9NR00 106 aa17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 SIRT4Q9Y6E7 314 aaPredicted RBP17.11■□□□□ 0.33
SDR39U1-216ENST00000556175 TRBV5-5A0A0J9YX44 114 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 SDCBPO00560 298 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 GPX5O75715 221 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 IGFBP3P17936 291 aaPredicted RBP17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 HNF4GQ14541 408 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 Q3ZCU0 254 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 SLC22A6Q4U2R8 563 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 SLC35E3Q7Z769 313 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 MOB3BQ86TA1 216 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 LINC00311Q8N616 119 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 COMMD1Q8N668 190 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 DPF1Q92782 380 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 ZNF581Q9P0T4 197 aa17.1■□□□□ 0.33
SDR39U1-216ENST00000556175 IGHV1-3A0A0C4DH29 117 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 A0A1W2PPE3 182 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 AIPO00170 330 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 MPIG6BO95866 241 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 FSTP19883 344 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 RPL23AP62750 156 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 TMEM30BQ3MIR4 351 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 DMKNQ6E0U4 476 aaPredicted RBP17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 ZNF329Q86UD4 541 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 IZUMO1Q8IYV9 350 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 LINC00482Q8N8I6 264 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 OR13C5Q8NGS8 318 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 MRPS24Q96EL2 167 aaKnown RBP17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 ZFP57Q9NU63 452 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 GFOD1Q9NXC2 390 aa17.09■□□□□ 0.33
SDR39U1-216ENST00000556175 C15orf65H3BRN8 121 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 LALBAP00709 142 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 IGHG2P01859 326 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 TAS2R43P59537 309 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 EBI3Q14213 229 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 ZNF497Q6ZNH5 498 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 TGIF2LXQ8IUE1 241 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 OR2T10Q8NGZ9 312 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 CYGBQ8WWM9 190 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 CLEC2DQ9UHP7 191 aa17.08■□□□□ 0.32
SDR39U1-216ENST00000556175 MCRIP1C9JLW8 97 aa17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 TXNL1O43396 289 aa17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 MT-ND4P03905 459 aa17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 JAGN1Q8N5M9 183 aa17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 PACRGLQ8N7B6 248 aa17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 CCDC107Q8WV48 283 aa17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 ORAI1Q96D31 301 aa17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 NOL4LQ96MY1 436 aaPredicted RBP17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 MCRIP2Q9BUT9 160 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 GON7Q9BXV9 100 aa17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 LIN7CQ9NUP9 197 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 RCC2Q9P258 522 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 MRPS28Q9Y2Q9 187 aaKnown RBP17.07■□□□□ 0.32
SDR39U1-216ENST00000556175 NCBP2LA6PVI3 153 aaKnown RBP17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 NUDT19A8MXV4 375 aa17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 SPINT2O43291 252 aa17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 REG1BP48304 166 aa17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 C6orf183Q5T699 404 aa17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 OR2W3Q7Z3T1 314 aa17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 CDH26Q8IXH8 852 aa17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 MRPL41Q8IXM3 137 aaKnown RBP17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 STPG2Q8N412 459 aa17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 EAF1Q96JC9 268 aaPredicted RBP17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 PGLYRP3Q96LB9 341 aa17.06■□□□□ 0.32
SDR39U1-216ENST00000556175 TRAV8-7A0A075B6U6 113 aa17.05■□□□□ 0.32
SDR39U1-216ENST00000556175 A0A1W2PP11 408 aa17.05■□□□□ 0.32
SDR39U1-216ENST00000556175 MAGEA13PA6NCF6 341 aa17.05■□□□□ 0.32
SDR39U1-216ENST00000556175 EFCAB10A6NFE3 127 aa17.05■□□□□ 0.32
SDR39U1-216ENST00000556175 AP4M1O00189 453 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms