RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 TMEM250H0YL14 139 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 CA2P00918 260 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 GTF2H1P32780 548 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 RAB25P57735 213 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 PLCXD2Q0VAA5 305 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 SKP2Q13309 424 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 UAP1Q16222 522 aaPredicted RBP0.23□□□□□ -2.37
SNX6-204ENST00000555541 ZNF426Q9BUY5 554 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 IL22Q9GZX6 179 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 OR2AG1Q9H205 316 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 PSMD13Q9UNM6 376 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 WASHC3Q9Y3C0 194 aa0.23□□□□□ -2.37
SNX6-204ENST00000555541 ZFHX2Q9C0A1 2572 aaPredicted RBP0.22□□□□□ -2.37
SNX6-204ENST00000555541 MYOFQ9NZM1 2061 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 SUPT3HB4E1H0 165 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 RNASEK-C17orf49H0YIS7 233 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 LTAP01374 205 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 PRKACAP17612 351 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 CCT6AP40227 531 aaKnown RBP0.22□□□□□ -2.37
SNX6-204ENST00000555541 PSMC5P62195 406 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 RAB11BQ15907 218 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 ZNF791Q3KP31 576 aaPredicted RBP0.22□□□□□ -2.37
SNX6-204ENST00000555541 AGTRAPQ6RW13 159 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 KRTAP19-3Q7Z4W3 81 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 ATPAF2Q8N5M1 289 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 OR5T3Q8NGG3 340 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 CERS2Q96G23 380 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 CENPNQ96H22 339 aaPredicted RBP0.22□□□□□ -2.37
SNX6-204ENST00000555541 BIRC8Q96P09 236 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 POMPQ9Y244 141 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 USH1CQ9Y6N9 552 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 PCDH15Q96QU1 1955 aa0.22□□□□□ -2.37
SNX6-204ENST00000555541 TNIKQ9UKE5 1360 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 IGKV3-7A0A075B6H7 116 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 IGHV3-15A0A0B4J1V0 119 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 SERTM2A0A1B0GWG4 89 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 CASQ2O14958 399 aaPredicted RBP0.21□□□□□ -2.38
SNX6-204ENST00000555541 HCRTO43612 131 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 SLC2A1P11166 492 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 GCLMP48507 274 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 TAL2Q16559 108 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 C10orf107Q8IVU9 208 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 TRIML2Q8N7C3 387 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 FAM184AQ8NB25 1140 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 UPK3BQ9BT76 320 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 DIABLOQ9NR28 239 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 PUS1Q9Y606 427 aaKnown RBP eCLIP0.21□□□□□ -2.38
SNX6-204ENST00000555541 ATAD5Q96QE3 1844 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 DISP1Q96F81 1524 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 KDM5BQ9UGL1 1544 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 SCN9AQ15858 1988 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 PLCH2O75038 1416 aa0.21□□□□□ -2.38
SNX6-204ENST00000555541 SLX4Q8IY92 1834 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 IGKV1-9A0A0C4DH69 117 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 SPOPO43791 374 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 PDCD6O75340 191 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 ZNF3P17036 446 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 RAP1GDS1P52306 607 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 RELAQ04206 551 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 NDUFAF6Q330K2 333 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 CLEC20AQ6ZU45 233 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 GATD1Q8NB37 220 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 DRAXINQ8NBI3 349 aaPredicted RBP0.2□□□□□ -2.38
SNX6-204ENST00000555541 CLHC1Q8NHS4 586 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 ACOT13Q9NPJ3 140 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 LZTFL1Q9NQ48 299 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 RHBDD3Q9Y3P4 386 aa0.2□□□□□ -2.38
SNX6-204ENST00000555541 TBL2Q9Y4P3 447 aaKnown RBP0.2□□□□□ -2.38
SNX6-204ENST00000555541 ARFGEF3Q5TH69 2177 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 CLUHO75153 1309 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 IGHV3-73A0A0B4J1V6 119 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 DHRS12A0PJE2 317 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 J3QLI3 93 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 CD8AP01732 235 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 IGHV3-30-3P0DP02 117 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 IL9P15248 144 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 CD200P41217 278 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 INPP1P49441 399 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 RHOAP61586 193 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 LRRC74AQ0VAA2 488 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 HES3Q5TGS1 186 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 SLC35F6Q8N357 371 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 LHFPL5Q8TAF8 219 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 FAM131CQ96AQ9 280 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 SLC35G5Q96KT7 338 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 NAP1L5Q96NT1 182 aaPredicted RBP0.19□□□□□ -2.38
SNX6-204ENST00000555541 VAT1Q99536 393 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 POTEKPQ9BYX7 375 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 MYH11P35749 1972 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 CACNA1BQ00975 2339 aa0.19□□□□□ -2.38
SNX6-204ENST00000555541 DSCAML1Q8TD84 2053 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 ZNF705FA8MVS1 300 aaPredicted RBP0.18□□□□□ -2.38
SNX6-204ENST00000555541 H3BPC8 53 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 LY6HO94772 140 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 IGKV5-2P06315 115 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 GALP22466 123 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 GABRA3P34903 492 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 TTPAP49638 278 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 AKR1C2P52895 323 aa0.18□□□□□ -2.38
SNX6-204ENST00000555541 ZNF90Q03938 601 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms