RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 TRRAPQ9Y4A5 3859 aa11□□□□□ -0.65
SNX6-203ENST00000555416 A0A0A6YYD4 124 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 SLC22A1O15245 554 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 MPIG6BO95866 241 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 DIAPH2-AS1Q14236 149 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 P2RY14Q15391 338 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 HLA-DRB5Q30154 266 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 GLT8D1Q68CQ7 371 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 Q6ZS46 218 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 ZNF367Q7RTV3 350 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 SPARTQ8N0X7 666 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 OR4K15Q8NH41 348 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 NICN1Q9BSH3 213 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 BLOC1S6Q9UL45 172 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 PSG11Q9UQ72 335 aa10.99□□□□□ -0.65
SNX6-203ENST00000555416 AK6Q9Y3D8 172 aaKnown RBP10.99□□□□□ -0.65
SNX6-203ENST00000555416 A0A1B0GUS0 222 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 A0A1W2PPE3 182 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 UBE2QL1A1L167 161 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A22PA8MWA6 464 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 MCRIP1C9JLW8 97 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 BUB1B-PAK6H3BSN5 160 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 RCC1P18754 421 aaPredicted RBP10.98□□□□□ -0.65
SNX6-203ENST00000555416 CALRP27797 417 aaKnown RBP10.98□□□□□ -0.65
SNX6-203ENST00000555416 HTR2CP28335 458 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 GABRA5P31644 462 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 GNG10P50151 68 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 DYNLT3P51808 116 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 GABARAPL2P60520 117 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 RBM39Q14498 530 aaKnown RBP10.98□□□□□ -0.65
SNX6-203ENST00000555416 HABP2Q14520 560 aaPredicted RBP10.98□□□□□ -0.65
SNX6-203ENST00000555416 TPTE2P1Q5T6R2 138 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 GAPTQ8N292 157 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 ZNF596Q8TC21 504 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 CITED1Q99966 193 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 ETAA1Q9NY74 926 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 VWFP04275 2813 aa10.98□□□□□ -0.65
SNX6-203ENST00000555416 MGAM2Q2M2H8 2515 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 IGHV3-43A0A0B4J1X8 118 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A10PA6NDY2 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A18PA6NE21 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A16PA6NEW6 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A20PA6NIJ5 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A7PA6NKC0 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 TMEM14DPA8MWL7 114 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A12PA8MX19 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A5PA8MXJ8 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A23PA8MXZ1 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 C12orf77C9JDV5 145 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 J3QR06 171 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 AIPO00170 330 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 TOR1AO14656 332 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 PDCD6O75340 191 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A15PP0C7V4 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A13PP0C7W8 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A14PP0C7W9 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FAM90A24PP0C7X0 464 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 IGHV3-43DP0DP04 118 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 FUT3P21217 361 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 CHATP28329 748 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 CLDN12P56749 244 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 LOXL3P58215 753 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 RPS27AP62979 156 aaKnown RBP10.97□□□□□ -0.65
SNX6-203ENST00000555416 PLA2G7Q13093 441 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 TRAM1Q15629 374 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 SYT6Q5T7P8 510 aaPredicted RBP10.97□□□□□ -0.65
SNX6-203ENST00000555416 Q6ZPA2 131 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 OR9G1Q8NH87 305 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 ARL11Q969Q4 196 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 SULT4A1Q9BR01 284 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 MMP28Q9H239 520 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 ZNF702PQ9H963 129 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 SPACA1Q9HBV2 294 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 ABCB10Q9NRK6 738 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 NDUFB11Q9NX14 153 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 GHRLQ9UBU3 117 aa10.97□□□□□ -0.65
SNX6-203ENST00000555416 LEUTXA8MZ59 168 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 F2RL2O00254 374 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 SLC17A2O00624 439 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 UBBP0CG47 229 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 GZMHP20718 246 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 PSMA1P25786 263 aaKnown RBP10.96□□□□□ -0.65
SNX6-203ENST00000555416 KIR2DS4P43632 304 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 EFNB2P52799 333 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 PRRX1P54821 245 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 OR10A3P58181 314 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 NKAPLQ5M9Q1 402 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 UBE2UQ5VVX9 321 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 CD200R1LQ6Q8B3 271 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 C6orf201Q7Z4U5 140 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 OR6M1Q8NGM8 313 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 OR1L1Q8NH94 360 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 SGMS2Q8NHU3 365 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 MRPL30Q8TCC3 161 aaKnown RBP10.96□□□□□ -0.65
SNX6-203ENST00000555416 RBMXL1Q96E39 390 aaKnown RBP10.96□□□□□ -0.65
SNX6-203ENST00000555416 FAAP24Q9BTP7 215 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 TM2D1Q9BX74 207 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 TMEM59Q9BXS4 323 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 CST11Q9H112 138 aa10.96□□□□□ -0.65
SNX6-203ENST00000555416 Q9H521 79 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms