RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SSTR5P35346 364 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 C17orf58Q2M2W7 97 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 KCTD21Q4G0X4 260 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 C6orf183Q5T699 404 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 TRAT1Q6PIZ9 186 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 ZNF497Q6ZNH5 498 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 LIAT1Q6ZQX7 453 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 OR10A7Q8NGE5 316 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 RFESDQ8TAC1 157 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 CCDC107Q8WV48 283 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 KIRREL1Q96J84 757 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 URM1Q9BTM9 101 aaKnown RBP9.81□□□□□ -0.84
SRP54-206ENST00000555317 C1RLQ9NZP8 487 aa9.81□□□□□ -0.84
SRP54-206ENST00000555317 TRAV39A0A0B4J263 110 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 TRDV1A0A1B0GX56 115 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 UBE2QL1A1L167 161 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 VGLL3A8MV65 326 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 LEUTXA8MZ59 168 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 SPINT2O43291 252 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 RRP9O43818 475 aaKnown RBP9.8□□□□□ -0.84
SRP54-206ENST00000555317 NDUFA7O95182 113 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 PAX6P26367 422 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 CFPP27918 469 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 CD34P28906 385 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 GDNFP39905 211 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 RPS27AP62979 156 aaKnown RBP9.8□□□□□ -0.84
SRP54-206ENST00000555317 NEDD8Q15843 81 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 C22orf42Q6IC83 251 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 OR10K2Q6IF99 312 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 OR2W3Q7Z3T1 314 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 OR4P4Q8NGL7 312 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 OR4C13Q8NGP0 309 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 OR9G1Q8NH87 305 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 ARL11Q969Q4 196 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 AJUBAQ96IF1 538 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 ZNF286AQ9HBT8 521 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 KCNIP1Q9NZI2 227 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 DPM3Q9P2X0 92 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 PITPNC1Q9UKF7 332 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 STUB1Q9UNE7 303 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 V9GY05 133 aa9.8□□□□□ -0.84
SRP54-206ENST00000555317 A0A087X0M5 115 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 TRAV1-2A0A0B4J238 106 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 A0A1B0GX30 115 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 POM121CA8CG34 1229 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 SDCBPO00560 298 aaPredicted RBP9.79□□□□□ -0.84
SRP54-206ENST00000555317 ORC5O43913 435 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 TNFAIP8O95379 198 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 MT-ND4P03905 459 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 RAB3BP20337 219 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 MDKP21741 143 aaPredicted RBP9.79□□□□□ -0.84
SRP54-206ENST00000555317 BRS3P32247 399 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 MNDAP41218 407 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 GNG10P50151 68 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 HLA-DRB5Q30154 266 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 SYT6Q5T7P8 510 aaPredicted RBP9.79□□□□□ -0.84
SRP54-206ENST00000555317 HES5Q5TA89 166 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 CCDC144NLQ6NUI1 221 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 CD200R1LQ6Q8B3 271 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 BAIAP2L2Q6UXY1 529 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 PRR18Q8N4B5 295 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 OR10X1Q8NGY0 326 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 OR4K15Q8NH41 348 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 CAPSLQ8WWF8 208 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 TAF15Q92804 592 aaKnown RBP eCLIP9.79□□□□□ -0.84
SRP54-206ENST00000555317 RPEQ96AT9 228 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 FAM3DQ96BQ1 224 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 MMP28Q9H239 520 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 KCNK15Q9H427 330 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 LINC00574Q9H8X3 128 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 CHMP1AQ9HD42 196 aaPredicted RBP9.79□□□□□ -0.84
SRP54-206ENST00000555317 PLEKHJ1Q9NW61 149 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 STEAP1Q9UHE8 339 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 SSR3Q9UNL2 185 aa9.79□□□□□ -0.84
SRP54-206ENST00000555317 CLPSL1A2RUU4 121 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 TMEM14DPA8MWL7 114 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 NPIPB11E5RHQ5 1161 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 IGHV3-7P01780 117 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 CGB3P0DN86 165 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 CGB7P0DN87 165 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 BLVRBP30043 206 aaPredicted RBP9.78□□□□□ -0.84
SRP54-206ENST00000555317 CLDN12P56749 244 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 UNC119Q13432 240 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 TMEM30BQ3MIR4 351 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 OLFML2AQ68BL7 652 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 SHISA2Q6UWI4 295 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 SLC16A12Q6ZSM3 486 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 DYNAPQ8N1N2 210 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 DTX3Q8N9I9 347 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 OR51D1Q8NGF3 324 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 LEAP2Q969E1 77 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 TOMM40LQ969M1 308 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 GFI1Q99684 422 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 NICN1Q9BSH3 213 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 ZNF747Q9BV97 191 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 TM2D1Q9BX74 207 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 NPFFR1Q9GZQ6 430 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 GNG12Q9UBI6 72 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 TCF19Q9Y242 345 aa9.78□□□□□ -0.84
SRP54-206ENST00000555317 MMP24Q9Y5R2 645 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms