RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 PHOSPHO2Q8TCD6 241 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 TIPINQ9BVW5 301 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 BEX2Q9BXY8 128 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZNF302Q9NR11 478 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 DNAJC27Q9NZQ0 273 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 KLF13Q9Y2Y9 288 aaPredicted RBP2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 RBMX2Q9Y388 322 aaKnown RBP2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 A0A1B0GUL6 1792 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 DOCK1Q14185 1865 aa2.86□□□□□ -1.95
CKS1BP1-201ENST00000555221 MYH7P12883 1935 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 KMT2BQ9UMN6 2715 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 CFAP47Q6ZTR5 3102 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 IZUMO1RA6ND01 250 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR2AT4A6NND4 320 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 SLC37A4O43826 429 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 NEMFO60524 1076 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 DHRS3O75911 302 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 CXorf1O96002 111 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 CD8AP01732 235 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 APOA1P02647 267 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 CDK1P06493 297 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 PFN1P07737 140 aaKnown RBP2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR5AC1P0C628 307 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 SEC11BP0C7V7 166 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 TGFBR1P36897 503 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 ANP32AP39687 249 aaKnown RBP2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 TUFMP49411 452 aaKnown RBP2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 RPS11P62280 158 aaKnown RBP eCLIP2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 STX4Q12846 297 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 FAM53BQ14153 422 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 ELOCQ15369 112 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 C18orf21Q32NC0 220 aaPredicted RBP2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 ACTL10Q5JWF8 245 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 CLEC12AQ5QGZ9 265 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 CYP4Z1Q86W10 505 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 CALHM3Q86XJ0 350 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 GAPTQ8N292 157 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 LINC00337Q8N6G1 96 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 C22orf15Q8WYQ4 148 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 C19orf60Q96EN9 201 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 PEBP4Q96S96 227 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 RMND1Q9NWS8 449 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZNF229Q9UJW7 825 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZNF292O60281 2723 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 SVILO95425 2214 aa2.85□□□□□ -1.95
CKS1BP1-201ENST00000555221 BAZ2AQ9UIF9 1905 aaKnown RBP2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 MGAT4DA6NG13 374 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 LYPLA2O95372 231 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 RLN2P04090 185 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 TAC1P20366 129 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 TEAD1P28347 426 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 SLC6A1P30531 599 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 VSNL1P62760 191 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 TNNC1P63316 161 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 IL15RAQ13261 267 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 BIKQ13323 160 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 GUSBP1Q15486 140 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 LRRC26Q2I0M4 334 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZNF404Q494X3 552 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 CLLU1OSQ5K130 101 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 TMEM69Q5SWH9 247 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 FAM131AQ6UXB0 335 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 TMEM136Q6ZRR5 245 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 PRNTQ86SH4 94 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZNF555Q8NEP9 628 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR8A1Q8NGG7 326 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 MBOAT7Q96N66 472 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 THTPAQ9BU02 230 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 OR2S2Q9NQN1 319 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 TAC3Q9UHF0 121 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 ZNF780BQ9Y6R6 833 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 MUC6Q6W4X9 2439 aa2.84□□□□□ -1.95
CKS1BP1-201ENST00000555221 FOCADQ5VW36 1801 aa2.84□□□□□ -1.96
CKS1BP1-201ENST00000555221 NAV1Q8NEY1 1877 aa2.84□□□□□ -1.96
CKS1BP1-201ENST00000555221 ZDBF2Q9HCK1 2354 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 BAZ2BQ9UIF8 2168 aaKnown RBP2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 LOC100506127A0A0U1RQW1 187 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 LOC389332A0A1B0GUA5 103 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 GMNCA6NCL1 334 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 RGS5O15539 181 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 ENSAO43768 121 aaKnown RBP2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 KCNK2O95069 426 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 GIMD1P0DJR0 217 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 SMIM10L2AP0DMW4 78 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 SMIM10L2BP0DMW5 78 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 CCL2P13500 99 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 XKP51811 444 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 SNRPFP62306 86 aaKnown RBP2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 C2orf80Q0P641 193 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 TNXAQ16473 311 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 CEACAM16Q2WEN9 425 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 Q3ZCU0 254 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 FBXO48Q5FWF7 155 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 LIN9Q5TKA1 542 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 SSX6Q7RTT6 188 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 ZBTB8OSQ8IWT0 167 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 OR4D6Q8NGJ1 314 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 OR8K3Q8NH51 312 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 PPP1R36Q96LQ0 422 aa2.83□□□□□ -1.96
CKS1BP1-201ENST00000555221 SRRQ9GZT4 340 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms