RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 VTCN1Q7Z7D3 282 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 PDCL2Q8N4E4 241 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 FDCSPQ8NFU4 85 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 OR1L1Q8NH94 360 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 S100PBPQ96BU1 408 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 WDR34Q96EX3 536 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 RDH12Q96NR8 316 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 SULT4A1Q9BR01 284 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 TREX1Q9NSU2 369 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 BTRCQ9Y297 605 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 PPIL1Q9Y3C6 166 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 KMT2CQ8NEZ4 4911 aaKnown RBP2.78□□□□□ -1.96
CHD8-207ENST00000554384 MYOFQ9NZM1 2061 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 SCN1AP35498 2009 aa2.78□□□□□ -1.96
CHD8-207ENST00000554384 BIRC6Q9NR09 4857 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 TLCD2A6NGC4 264 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 ZNF701M0R085 212 aaPredicted RBP2.77□□□□□ -1.97
CHD8-207ENST00000554384 CCDC22O60826 627 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 PRKACAP17612 351 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 CXCR1P25024 350 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 DEFA6Q01524 100 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 KLHL12Q53G59 568 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 EPGNQ6UW88 154 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 DAW1Q8N136 415 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 STK40Q8N2I9 435 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 MIR7-3HGQ8N6C7 128 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 DDI1Q8WTU0 396 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 ZFP3Q96NJ6 502 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 GPR82Q96P67 336 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 PKMYT1Q99640 499 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 DDA1Q9BW61 102 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 CA10Q9NS85 328 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 TAS2R5Q9NYW4 299 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 VAX2Q9UIW0 290 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 SCML1Q9UN30 329 aa2.77□□□□□ -1.97
CHD8-207ENST00000554384 ZNF638Q14966 1978 aaKnown RBP2.76□□□□□ -1.97
CHD8-207ENST00000554384 TNRC6AQ8NDV7 1962 aaKnown RBP2.76□□□□□ -1.97
CHD8-207ENST00000554384 HIVEP2P31629 2446 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 E7EWF7 191 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 DFFAO00273 331 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 PIRO00625 290 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 GCGP01275 180 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 CRYGCP07315 174 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 GFAPP14136 432 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 SPAM1P38567 509 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 CSKP41240 450 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 HNRNPA1L2Q32P51 320 aaKnown RBP2.76□□□□□ -1.97
CHD8-207ENST00000554384 C9orf64Q5T6V5 341 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 ZCCHC24Q8N2G6 241 aaKnown RBP2.76□□□□□ -1.97
CHD8-207ENST00000554384 SPANXA2-OT1Q8N9U9 137 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 GATSQ8NAP1 163 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 ST20-AS1Q8NBB2 130 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 CCDC112Q8NEF3 446 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 Q96MT0 163 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 ALS2CR12Q96Q35 445 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 NAPGQ99747 312 aaPredicted RBP2.76□□□□□ -1.97
CHD8-207ENST00000554384 ACBD6Q9BR61 282 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 CHCHD7Q9BUK0 85 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 SFXN3Q9BWM7 321 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 ZSCAN16Q9H4T2 348 aaPredicted RBP2.76□□□□□ -1.97
CHD8-207ENST00000554384 ARMC7Q9H6L4 198 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 PLEKHF2Q9H8W4 249 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 KLF12Q9Y4X4 402 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 POLEQ07864 2286 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 ANK2Q01484 3957 aa2.76□□□□□ -1.97
CHD8-207ENST00000554384 OBSL1O75147 1896 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 IGHV1-3A0A0C4DH29 117 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 SPTY2D1-AS1A0A0U1RR47 76 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 CENPXA8MT69 81 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 CEACAM18A8MTB9 384 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 SLC16A4O15374 487 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 GATBO75879 557 aaKnown RBP2.75□□□□□ -1.97
CHD8-207ENST00000554384 PTHP01270 115 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 GALR1P47211 349 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 KRTAP10-10P60014 251 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 ZNF235Q14590 738 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 C6orf183Q5T699 404 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 FAM222AQ5U5X8 452 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 XKRXQ6PP77 449 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 SLC35D2Q76EJ3 337 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 SLC35G3Q8N808 338 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 WFDC5Q8TCV5 224 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 TMEM234Q8WY98 164 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 EMC6Q9BV81 110 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 OR51B5Q9H339 312 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 KIR3DX1Q9H7L2 352 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 LINC00574Q9H8X3 128 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 RP1P56715 2156 aa2.75□□□□□ -1.97
CHD8-207ENST00000554384 LOC102724200A0A096LPH7 203 aaPredicted RBP2.74□□□□□ -1.97
CHD8-207ENST00000554384 IGKV1-6A0A0C4DH72 117 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 PSPHP1O15172 72 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 GMDSO60547 372 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 LYPLA2O95372 231 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 ETHE1O95571 254 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 IGKV1-39P01597 117 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 IGKV1D-39P04432 117 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 CTSEP14091 401 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 NTF3P20783 257 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 CPN2P22792 545 aa2.74□□□□□ -1.97
CHD8-207ENST00000554384 IVDP26440 423 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms