RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ZFPL1O95159 310 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IGKV1D-33P01593 117 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IGKV1-33P01594 117 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IGHV3-23P01764 117 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IGHMP01871 453 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TTRP02766 147 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR2T7P0C7T2 308 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 DBTP11182 482 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PSKH1P11801 424 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 GTF2F2P13984 249 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PPP1CCP36873 323 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 VDAC2P45880 294 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR3A3P47888 321 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 INPP1P49441 399 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 UBA52P62987 128 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PLA2G7Q13093 441 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ALKBH1Q13686 389 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 EFNB3Q15768 340 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 UBE2V2Q15819 145 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 KLHL22Q53GT1 634 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IDNKQ5T6J7 187 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 SYT6Q5T7P8 510 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 C11orf71Q6IPW1 123 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 C10orf99Q6UWK7 81 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 SNX29P2Q8IUI4 249 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TEX29Q8N6K0 151 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR51D1Q8NGF3 324 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR6M1Q8NGM8 313 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 MRPS24Q96EL2 167 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ABHD14BQ96IU4 210 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ABHD1Q96SE0 405 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 FUZQ9BT04 418 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 FAAP24Q9BTP7 215 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 C20orf24Q9BUV8 137 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TMPRSS13Q9BYE2 586 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 METTL9Q9H1A3 318 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 METTL8Q9H825 291 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 RNPEPL1Q9HAU8 725 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 S100A14Q9HCY8 104 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 HRASLSQ9HDD0 168 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 NOX4Q9NPH5 578 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ABRACLQ9P1F3 81 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 KIAA1456Q9P272 454 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ABCD2Q9UBJ2 740 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 MRM2Q9UI43 246 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 MPC1Q9Y5U8 109 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PUS1Q9Y606 427 aaKnown RBP eCLIP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 R4GMQ9 66 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 SRRM2Q9UQ35 2752 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IGHV1-69DA0A0B4J2H0 117 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IGHV2-70DA0A0C4DH43 119 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 J3QT63 122 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 AIPO00170 330 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 SDCBPO00560 298 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 EREGO14944 169 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 NXPH3O95157 252 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 LYPD3O95274 346 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TNFRSF6BO95407 300 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR2H2O95918 312 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IGHV1-69P01742 117 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IGHV3-48P01763 117 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PRB4P10163 310 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 CPT2P23786 658 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 MYL9P24844 172 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 LOXP28300 417 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 CFHR2P36980 270 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ECI1P42126 302 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 KIR3DL2P43630 455 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 LIMS1P48059 325 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 AQP4P55087 323 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 RAB4BP61018 213 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 FGL1Q08830 312 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IRF3Q14653 427 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 SLC9A3R2Q15599 337 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ACSM3Q53FZ2 586 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 HSD17B12Q53GQ0 312 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 NXNL2Q5VZ03 156 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 C22orf42Q6IC83 251 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 LINC00114Q6XXX2 140 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 C6orf201Q7Z4U5 140 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TGIF2LXQ8IUE1 241 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR2AK2Q8NG84 335 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR4X2Q8NGF9 303 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR52N1Q8NH53 320 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR51H1Q8NH63 302 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 CD300LFQ8TDQ1 290 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 SECTM1Q8WVN6 248 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 RNF133Q8WVZ7 376 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ASB17Q8WXJ9 295 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 CFHR4Q92496 578 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 GGHQ92820 318 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PINX1Q96BK5 328 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF479Q96JC4 524 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 CMSS1Q9BQ75 279 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 YIPF3Q9GZM5 350 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PRSS22Q9GZN4 317 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ANKRD19PQ9H560 264 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TUBA4BQ9H853 241 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR6C3Q9NZP0 311 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 COMMD3Q9UBI1 195 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms