RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 CST5P28325 142 aaPredicted RBP8.23□□□□□ -1.09
SIX4-202ENST00000554079 PRRX1P54821 245 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 RAC3P60763 192 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 RPL18Q07020 188 aaKnown RBP8.23□□□□□ -1.09
SIX4-202ENST00000554079 ZP4Q12836 540 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 ELAVL3Q14576 367 aaKnown RBP8.23□□□□□ -1.09
SIX4-202ENST00000554079 SPIN3Q5JUX0 258 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 TSPO2Q5TGU0 170 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 KCTD18Q6PI47 426 aaPredicted RBP8.23□□□□□ -1.09
SIX4-202ENST00000554079 DNM1P34Q6PK57 102 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 PARS2Q7L3T8 475 aaKnown RBP8.23□□□□□ -1.09
SIX4-202ENST00000554079 ABHD12BQ7Z5M8 362 aaPredicted RBP8.23□□□□□ -1.09
SIX4-202ENST00000554079 CDRT4Q8N9R6 151 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 OR2M3Q8NG83 312 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 OR52N5Q8NH56 324 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 RTN4IP1Q8WWV3 396 aaPredicted RBP8.23□□□□□ -1.09
SIX4-202ENST00000554079 LINC00615Q96LM1 132 aaPredicted RBP8.23□□□□□ -1.09
SIX4-202ENST00000554079 FAM103A1Q9BTL3 118 aaKnown RBP8.23□□□□□ -1.09
SIX4-202ENST00000554079 MMP17Q9ULZ9 603 aa8.23□□□□□ -1.09
SIX4-202ENST00000554079 SAA2-SAA4A0A096LPE2 208 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 NKX2-6A6NCS4 301 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 SHISA7A6NL88 538 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 TRAF3IP2O43734 574 aaPredicted RBP8.22□□□□□ -1.09
SIX4-202ENST00000554079 SSSCA1O60232 199 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 ASAH2BP0C7U1 165 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 GDF1P27539 372 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 NKX2-1P43699 371 aaPredicted RBP8.22□□□□□ -1.09
SIX4-202ENST00000554079 POLR2LP62875 67 aaKnown RBP8.22□□□□□ -1.09
SIX4-202ENST00000554079 DEFB128Q7Z7B8 93 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 FAM222BQ8WU58 562 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 OVCA2Q8WZ82 227 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 NEUROG1Q92886 237 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 ABHD14BQ96IU4 210 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 LRFN3Q9BTN0 628 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 PECRQ9BY49 303 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 WNT10AQ9GZT5 417 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 TMEM38BQ9NVV0 291 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 ABI3Q9P2A4 366 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 PILRBQ9UKJ0 227 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 GOLGA4Q13439 2230 aaKnown RBP8.22□□□□□ -1.09
SIX4-202ENST00000554079 ARHGAP21Q5T5U3 1957 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 TRAV26-1A0A087WT03 109 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 IGLV1-36A0A0B4J1U3 117 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 TRAV8-6A0A0B4J262 113 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 DPRXA6NFQ7 191 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 GRXCR1A8MXD5 290 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 HLA-DQA2P01906 255 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 REG1AP05451 166 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 OR3A4PP47883 348 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 ZNF133P52736 654 aaPredicted RBP8.22□□□□□ -1.09
SIX4-202ENST00000554079 CRYBA4P53673 196 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 MLF1P58340 268 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 SELENOVP59797 346 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 UFSP1Q6NVU6 142 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 CBLN3Q6UW01 205 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 BAGE3Q86Y29 109 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 BAGE2Q86Y30 109 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 OR4N5Q8IXE1 308 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 NRSN1Q8IZ57 195 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 C5orf17Q8NAS9 161 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 VN1R2Q8NFZ6 395 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 OR4P4Q8NGL7 312 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 MRPL30Q8TCC3 161 aaKnown RBP8.22□□□□□ -1.09
SIX4-202ENST00000554079 ZNF296Q8WUU4 475 aaPredicted RBP8.22□□□□□ -1.09
SIX4-202ENST00000554079 SIGLEC12Q96PQ1 595 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 SPACA5Q96QH8 159 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 NKX2-4Q9H2Z4 354 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 MMP25Q9NPA2 562 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 HS3ST2Q9Y278 367 aa8.22□□□□□ -1.09
SIX4-202ENST00000554079 ALPK2Q86TB3 2170 aa8.21□□□□□ -1.09
SIX4-202ENST00000554079 ALG1L2C9J202 215 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 ZNF878C9JN71 531 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 MDH2P40926 338 aaKnown RBP8.21□□□□□ -1.1
SIX4-202ENST00000554079 FMODQ06828 376 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 BVES-AS1Q5T3Y7 98 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 WBP2NLQ6ICG8 309 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 Q6ZNB5 142 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 ZNF765Q7L2R6 523 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 NEGR1Q7Z3B1 354 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 OR5AS1Q8N127 324 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 SUMF1Q8NBK3 374 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 ST6GALNAC3Q8NDV1 305 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 OR1K1Q8NGR3 316 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 SOCS4Q8WXH5 440 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 APOOQ9BUR5 198 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 FOXQ1Q9C009 403 aa8.21□□□□□ -1.1
SIX4-202ENST00000554079 MRPL18Q9H0U6 180 aaKnown RBP8.21□□□□□ -1.1
SIX4-202ENST00000554079 SLC33A1O00400 549 aaPredicted RBP8.2□□□□□ -1.1
SIX4-202ENST00000554079 NRASP01111 189 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 KRASP01116 189 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 CGAP01215 116 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 IGKV1D-16P01601 117 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 ZNF728P0DKX0 622 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 AZU1P20160 251 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 CBLN1P23435 193 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 CEACAM3P40198 252 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 NPBWR2P48146 333 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 RAB9AP51151 201 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 PSG4Q00888 419 aa8.2□□□□□ -1.1
SIX4-202ENST00000554079 PRDX1Q06830 199 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms