RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 RANBP1P43487 201 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 IER3P46695 156 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 PLA1AQ53H76 456 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 C6orf201Q7Z4U5 140 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 RTN4RL2Q86UN3 420 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 ABHD12Q8N2K0 398 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 TMEM86BQ8N661 226 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 BEND2Q8NDZ0 799 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 UBALD1Q8TB05 177 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 KIRREL1Q96J84 757 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 SULT4A1Q9BR01 284 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 CHIAQ9BZP6 476 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 DPAGT1Q9H3H5 408 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 ZNF286AQ9HBT8 521 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 TRAPPC2LQ9UL33 140 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 TBL2Q9Y4P3 447 aaKnown RBP18.52■□□□□ 0.56
TDP1-206ENST00000553569 POMT1Q9Y6A1 747 aa18.52■□□□□ 0.56
TDP1-206ENST00000553569 BTBD17A6NE02 478 aa18.51■□□□□ 0.55
TDP1-206ENST00000553569 GLAP06280 429 aa18.51■□□□□ 0.55
TDP1-206ENST00000553569 SLC2A2P11168 524 aaPredicted RBP18.51■□□□□ 0.55
TDP1-206ENST00000553569 BLVRBP30043 206 aaPredicted RBP18.51■□□□□ 0.55
TDP1-206ENST00000553569 SDC2P34741 201 aa18.51■□□□□ 0.55
TDP1-206ENST00000553569 PLA2G7Q13093 441 aa18.51■□□□□ 0.55
TDP1-206ENST00000553569 NDNFQ8TB73 568 aa18.51■□□□□ 0.55
TDP1-206ENST00000553569 CENPOQ9BU64 300 aa18.51■□□□□ 0.55
TDP1-206ENST00000553569 LIN7BQ9HAP6 207 aa18.51■□□□□ 0.55
TDP1-206ENST00000553569 COL6A5A8TX70 2615 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 TRIM64CA6NLI5 447 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 SOCS1O15524 211 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 JUNBP17275 347 aaPredicted RBP18.5■□□□□ 0.55
TDP1-206ENST00000553569 MXD1Q05195 221 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 LDLRAD2Q5SZI1 272 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 UTF1Q5T230 341 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 C16orf87Q6PH81 154 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 TPRA1Q86W33 373 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 LEAP2Q969E1 77 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 ARL11Q969Q4 196 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 YIPF6Q96EC8 236 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 FAAP24Q9BTP7 215 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 FBLN5Q9UBX5 448 aa18.5■□□□□ 0.55
TDP1-206ENST00000553569 NOTOA8MTQ0 251 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 NPIPB11E5RHQ5 1161 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 LDLRAD4O15165 306 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 CA11O75493 328 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 IGHV3-7P01780 117 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 CLEC2LP0C7M8 214 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 SMIM18P0DKX4 95 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 GZMHP20718 246 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 CFPP27918 469 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 VEGFCP49767 419 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 SSX2Q16385 188 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 LRRC75BQ2VPJ9 315 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 TIMM50Q3ZCQ8 353 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 DYNAPQ8N1N2 210 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 OR4P4Q8NGL7 312 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 TAF15Q92804 592 aaKnown RBP eCLIP18.49■□□□□ 0.55
TDP1-206ENST00000553569 GCDHQ92947 438 aaPredicted RBP18.49■□□□□ 0.55
TDP1-206ENST00000553569 SSX3Q99909 188 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 PLEKHJ1Q9NW61 149 aa18.49■□□□□ 0.55
TDP1-206ENST00000553569 C15orf65H3BRN8 121 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 H3BUX3 64 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 TOR1AO14656 332 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 CD34P28906 385 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 EFNB2P52799 333 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 FAM189A2Q15884 450 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 C6orf183Q5T699 404 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 MINOS1Q5TGZ0 78 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 GAPTQ8N292 157 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 ZNF596Q8TC21 504 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 MRPL30Q8TCC3 161 aaKnown RBP18.48■□□□□ 0.55
TDP1-206ENST00000553569 MEGF9Q9H1U4 602 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 LINC00574Q9H8X3 128 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 DAPK2Q9UIK4 370 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 RAB22AQ9UL26 194 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 HILPDAQ9Y5L2 63 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 MINOS1-NBL1R4GNA1 71 aa18.48■□□□□ 0.55
TDP1-206ENST00000553569 A0A087X0M5 115 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 A0A1B0GX30 115 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 FAM181BA6NEQ2 426 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 C12orf77C9JDV5 145 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 AIREO43918 545 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 RCC1P18754 421 aaPredicted RBP18.47■□□□□ 0.55
TDP1-206ENST00000553569 HTR1DP28221 377 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 GNG10P50151 68 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 SFXN4Q6P4A7 337 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 PRR18Q8N4B5 295 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 FAM89BQ8N5H3 189 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 MALSU1Q96EH3 234 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 CHMP1AQ9HD42 196 aaPredicted RBP18.47■□□□□ 0.55
TDP1-206ENST00000553569 VPREB3Q9UKI3 123 aa18.47■□□□□ 0.55
TDP1-206ENST00000553569 IGHV3-43A0A0B4J1X8 118 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 SDCBPO00560 298 aaPredicted RBP18.46■□□□□ 0.55
TDP1-206ENST00000553569 ORC5O43913 435 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 GPR137BO60478 399 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 IGHV3-43DP0DP04 118 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 TGFBR1P36897 503 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 LSM3P62310 102 aaKnown RBP18.46■□□□□ 0.55
TDP1-206ENST00000553569 LY6EQ16553 131 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 HLA-DRB5Q30154 266 aa18.46■□□□□ 0.55
TDP1-206ENST00000553569 OR10A7Q8NGE5 316 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms