RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 SSX2Q16385 188 aa19.13■□□□□ 0.65
TDP1-205ENST00000553527 C2orf76Q3KRA6 126 aa19.13■□□□□ 0.65
TDP1-205ENST00000553527 IDNKQ5T6J7 187 aa19.13■□□□□ 0.65
TDP1-205ENST00000553527 SHISA2Q6UWI4 295 aa19.13■□□□□ 0.65
TDP1-205ENST00000553527 DYNAPQ8N1N2 210 aa19.13■□□□□ 0.65
TDP1-205ENST00000553527 NDNFQ8TB73 568 aa19.13■□□□□ 0.65
TDP1-205ENST00000553527 TMEM133Q9H2Q1 129 aa19.13■□□□□ 0.65
TDP1-205ENST00000553527 GAL3ST2Q9H3Q3 398 aa19.13■□□□□ 0.65
TDP1-205ENST00000553527 ZNF581Q9P0T4 197 aa19.13■□□□□ 0.65
TDP1-205ENST00000553527 TRAV24A0A0B4J272 114 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 TMEM272A0A1B0GTI8 110 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A10PA6NDY2 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A18PA6NE21 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A16PA6NEW6 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A20PA6NIJ5 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A8PA6NJQ4 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A7PA6NKC0 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A22PA8MWA6 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A12PA8MX19 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A5PA8MXJ8 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A23PA8MXZ1 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 NDUFA7O95182 113 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A15PP0C7V4 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A13PP0C7W8 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A14PP0C7W9 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM90A24PP0C7X0 464 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 CDK2P24941 298 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 RPL15P61313 204 aaKnown RBP19.12■□□□□ 0.65
TDP1-205ENST00000553527 SRSF4Q08170 494 aaKnown RBP19.12■□□□□ 0.65
TDP1-205ENST00000553527 FAM189A2Q15884 450 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 OR11H6Q8NGC7 330 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 URM1Q9BTM9 101 aaKnown RBP19.12■□□□□ 0.65
TDP1-205ENST00000553527 DCSTAMPQ9H295 470 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 IFT22Q9H7X7 185 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 FBLN5Q9UBX5 448 aa19.12■□□□□ 0.65
TDP1-205ENST00000553527 MEIKINA0A087WXM9 373 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 IGHV2-26A0A0B4J1V2 119 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 CLPSL1A2RUU4 121 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 CCDC160A6NGH7 325 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 CSN2P05814 226 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 LDLRAD2Q5SZI1 272 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 ATAD3CQ5T2N8 411 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 OLFML2AQ68BL7 652 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 ZNF626Q68DY1 528 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 Q6ZSV7 163 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 CORO2AQ92828 525 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 SLC25A46Q96AG3 418 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 ISOC1Q96CN7 298 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 CLEC7AQ9BXN2 247 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 BARHL1Q9BZE3 327 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 SPACA1Q9HBV2 294 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 TBL2Q9Y4P3 447 aaKnown RBP19.11■□□□□ 0.65
TDP1-205ENST00000553527 RNF114Q9Y508 228 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 HILPDAQ9Y5L2 63 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 MMP24Q9Y5R2 645 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 FBN3Q75N90 2809 aa19.11■□□□□ 0.65
TDP1-205ENST00000553527 A0A1B0GUS0 222 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 ODF3BA8MYP8 253 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 LDLRAD4O15165 306 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 TMEM127O75204 238 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 SNRPBP14678 240 aaKnown RBP19.1■□□□□ 0.65
TDP1-205ENST00000553527 GDNFP39905 211 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 BRICD5Q6PL45 260 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 ABHD12Q8N2K0 398 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 SUMF2Q8NBJ7 301 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 LINC01006Q8NI28 216 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 LGALS14Q8TCE9 139 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 MALSU1Q96EH3 234 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 DPCDQ9BVM2 203 aaPredicted RBP19.1■□□□□ 0.65
TDP1-205ENST00000553527 TM2D1Q9BX74 207 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 TAS2R3Q9NYW6 316 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 KIF25Q9UIL4 384 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 RAB22AQ9UL26 194 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 CEPT1Q9Y6K0 416 aa19.1■□□□□ 0.65
TDP1-205ENST00000553527 H3BUI4 141 aa19.09■□□□□ 0.65
TDP1-205ENST00000553527 RAB6AP20340 208 aa19.09■□□□□ 0.65
TDP1-205ENST00000553527 GLP1RP43220 463 aa19.09■□□□□ 0.65
TDP1-205ENST00000553527 HEPN1Q6WQI6 88 aa19.09■□□□□ 0.65
TDP1-205ENST00000553527 PLPPR1Q8TBJ4 325 aa19.09■□□□□ 0.65
TDP1-205ENST00000553527 NICN1Q9BSH3 213 aa19.09■□□□□ 0.65
TDP1-205ENST00000553527 LPAR5Q9H1C0 372 aa19.09■□□□□ 0.65
TDP1-205ENST00000553527 ABCB10Q9NRK6 738 aa19.09■□□□□ 0.65
TDP1-205ENST00000553527 OR6C3Q9NZP0 311 aa19.09■□□□□ 0.65
TDP1-205ENST00000553527 RCC2Q9P258 522 aaKnown RBP19.09■□□□□ 0.65
TDP1-205ENST00000553527 TRAV39A0A0B4J263 110 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 H3BMQ9 156 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 NFYBP25208 207 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 PLA2G7Q13093 441 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 SPCS2Q15005 226 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 OR52W1Q6IF63 320 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 RAB12Q6IQ22 244 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 ZNF565Q8N9K5 539 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 SGMS2Q8NHU3 365 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 NEK7Q8TDX7 302 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 ETV7Q9Y603 341 aa19.08■□□□□ 0.64
TDP1-205ENST00000553527 ZNF729A6NN14 1252 aaPredicted RBP19.07■□□□□ 0.64
TDP1-205ENST00000553527 PDCD6O75340 191 aa19.07■□□□□ 0.64
TDP1-205ENST00000553527 KCNJ3P48549 501 aa19.07■□□□□ 0.64
TDP1-205ENST00000553527 EFNB2P52799 333 aa19.07■□□□□ 0.64
TDP1-205ENST00000553527 SCAND1P57086 179 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms