RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 V9GYS6 101 aa4.11□□□□□ -1.75
HOXB3-213ENST00000552000 PKD1P98161 4303 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 TRBV2A0A0J9YWF9 115 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 A0A1B0GTI1 187 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 KBTBD11-OT1A0A1B0GTJ5 212 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 CXorf65A6NEN9 183 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 ZNF729A6NN14 1252 aaPredicted RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 TNFRSF11BO00300 401 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 HSD17B6O14756 317 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 SH2D1BO14796 132 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 GMNNO75496 209 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 BAG2O95816 211 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 IGLV1-51P01701 117 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 SEMG1P04279 462 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 IGF1P05019 195 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 FABP3P05413 133 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 SLC2A2P11168 524 aaPredicted RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 SOX6P35712 828 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 KIR3DL2P43630 455 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 RAB9AP51151 201 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 RIDAP52758 137 aaKnown RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 CDC42P60953 191 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 RPS7P62081 194 aaKnown RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 SCN1BQ07699 218 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 PPP1R8Q12972 351 aaKnown RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 BNIP1Q12981 228 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 ATXN7L3Q14CW9 347 aaPredicted RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 ZNF146Q15072 292 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 UBE2V2Q15819 145 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 KRBOX4Q5JUW0 171 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 BCL2L15Q5TBC7 163 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 ANKRD13BQ86YJ7 626 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 Q8IYB0 196 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 IZUMO1Q8IYV9 350 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 PGAM4Q8N0Y7 254 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 AQP11Q8NBQ7 271 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 BBS1Q8NFJ9 593 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 OR10X1Q8NGY0 326 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 RFESDQ8TAC1 157 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 HAVCR2Q8TDQ0 301 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 COQ2Q96H96 371 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 MYCBPQ99417 103 aaPredicted RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 HOPXQ9BPY8 73 aaPredicted RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 SIKE1Q9BRV8 207 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 ELOVL1Q9BW60 279 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 MROQ9BYG7 248 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 TOLLIPQ9H0E2 274 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 PPIL3Q9H2H8 161 aaKnown RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 OR51J1Q9H342 316 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 EXOSC4Q9NPD3 245 aaKnown RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 IL1RAPQ9NPH3 570 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 INTS9Q9NV88 658 aaKnown RBP4.1□□□□□ -1.75
HOXB3-213ENST00000552000 CALYQ9NYX4 217 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 IDI2-AS1Q9NZ38 188 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 IKZF2Q9UKS7 526 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 STUB1Q9UNE7 303 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 CEPT1Q9Y6K0 416 aa4.1□□□□□ -1.75
HOXB3-213ENST00000552000 ZNF736B4DX44 427 aaPredicted RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 LOC110117498-PIK3R3F6TDL0 507 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 ATP6V0E1O15342 81 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 MAGEB4O15481 346 aaPredicted RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 EDF1O60869 148 aaKnown RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 KRT36O76013 467 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 CCNB2O95067 398 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 MOSP00540 346 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 IL1AP01583 271 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 IGHV3-11P01762 117 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 GAPDHP04406 335 aaKnown RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 MRPL3P09001 348 aaKnown RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 LGALS1P09382 135 aaKnown RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 CGB3P0DN86 165 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 CGB7P0DN87 165 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 COX4I1P13073 169 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 ZNF44P15621 663 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 PPIFP30405 207 aaKnown RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 FUT6P51993 359 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 F2RL1P55085 397 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 ZNF816Q0VGE8 651 aaPredicted RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 ODF4Q2M2E3 257 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 SPIN3Q5JUX0 258 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 C8orf82Q6P1X6 216 aaPredicted RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 DEGS2Q6QHC5 323 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 PLEKHG7Q6ZR37 379 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 GTSCR1Q86UQ5 136 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 ZNF679Q8IYX0 411 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 ELMOD2Q8IZ81 293 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 OR13A1Q8NGR1 328 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 TEX47Q8TBZ9 253 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 CASTOR1Q8WTX7 329 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 BORCS8Q96FH0 119 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 MNTQ99583 582 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 OSBPL10Q9BXB5 764 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 YIPF3Q9GZM5 350 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 PLEKHA3Q9HB20 300 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 SEPSECSQ9HD40 501 aaKnown RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 HMG20AQ9NP66 347 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 PARP11Q9NR21 331 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 CHCHD3Q9NX63 227 aaKnown RBP4.09□□□□□ -1.75
HOXB3-213ENST00000552000 OR6C3Q9NZP0 311 aa4.09□□□□□ -1.75
HOXB3-213ENST00000552000 ZNF107Q9UII5 783 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms