RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 TFAP2CQ92754 450 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 EAF1Q96JC9 268 aaPredicted RBP18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 RASL11BQ9BPW5 248 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 JAM3Q9BX67 310 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 ABCG5Q9H222 651 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 ERVK13-1Q9NX77 482 aa18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 RPL36Q9Y3U8 105 aaKnown RBP18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 SIRT4Q9Y6E7 314 aaPredicted RBP18.19■□□□□ 0.5
SMARCD1-209ENST00000550477 ZNF780AO75290 641 aaPredicted RBP18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 PPP3R1P63098 170 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 GPR50Q13585 617 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 KLHL22Q53GT1 634 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 C9orf66Q5T8R8 295 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 ASCL4Q6XD76 172 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 IZUMO1Q8IYV9 350 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 STX19Q8N4C7 294 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 OR8H1Q8NGG4 311 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 OR10K1Q8NGX5 313 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 GPR148Q8TDV2 347 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 PYDC1Q8WXC3 89 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 ARL11Q969Q4 196 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 IFT22Q9H7X7 185 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 DCLRE1BQ9H816 532 aa18.18■□□□□ 0.5
SMARCD1-209ENST00000550477 A0A1W2PPE3 182 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 SDCBPO00560 298 aaPredicted RBP18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 TXNL1O43396 289 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 ELANEP08246 267 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 CD1BP29016 333 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 GPR12P47775 334 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 CDX1P47902 265 aaPredicted RBP18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 SOX2P48431 317 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 ATAD3CQ5T2N8 411 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 C10orf67Q8IYJ2 551 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 LINC00311Q8N616 119 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 C8orf31Q8N9H6 132 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 OR52N1Q8NH53 320 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 NEK7Q8TDX7 302 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 TMEM138Q9NPI0 162 aa18.17■□□□□ 0.5
SMARCD1-209ENST00000550477 ORC5O43913 435 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 MOSP00540 346 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 ZNF93P35789 620 aaPredicted RBP18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 REG1BP48304 166 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 FOXE3Q13461 319 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 KIR2DS1Q14954 304 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 MPV17LQ2QL34 196 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 Q3ZCU0 254 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 NHLRC3Q5JS37 347 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 ZNF529Q6P280 563 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 ZFP1Q6P2D0 407 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 RAX2Q96IS3 184 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 TAS2R4Q9NYW5 299 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 IL36GQ9NZH8 169 aa18.16■□□□□ 0.5
SMARCD1-209ENST00000550477 IGHV3-72A0A0B4J1Y9 119 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 TRAV39A0A0B4J263 110 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 VDAC1P21796 283 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 RBM11P57052 281 aaKnown RBP18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 GPR176Q14439 515 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 CCDC58Q4VC31 144 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 LCNL1Q6ZST4 164 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 OR51A2Q8NGJ7 313 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 DUX3Q96PT4 197 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 AMBNQ9NP70 447 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 CHCHD3Q9NX63 227 aaKnown RBP18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 U3KQK5 164 aa18.15■□□□□ 0.5
SMARCD1-209ENST00000550477 E9PI62 339 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 DYNC1I1O14576 645 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 CDRT1O95170 752 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 RPLP1P05386 114 aaKnown RBP18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 OR5H8P0DN80 308 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 SERPINA2P20848 420 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 DDI2Q5TDH0 399 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 RPL22L1Q6P5R6 122 aaKnown RBP18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 CBR4Q8N4T8 237 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 Q8N9W7 124 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 RHOXF1Q8NHV9 184 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 CCDC107Q8WV48 283 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 RTN4IP1Q8WWV3 396 aaPredicted RBP18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 TMEM106AQ96A25 262 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 SPACA1Q9HBV2 294 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 GFOD1Q9NXC2 390 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 AASSQ9UDR5 926 aa18.14■□□□□ 0.49
SMARCD1-209ENST00000550477 LINC01548A6NM66 108 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 AIPO00170 330 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 GEMIN2O14893 280 aaKnown RBP18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 SPINT2O43291 252 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 GTF2F2P13984 249 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 GABRB1P18505 474 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 BDKRB2P30411 391 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 TMEM30BQ3MIR4 351 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 TMPRSS11AQ6ZMR5 421 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 S1PR3Q99500 378 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 CHCHD6Q9BRQ6 235 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 C9orf16Q9BUW7 83 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 NBEAL2Q6ZNJ1 2754 aa18.13■□□□□ 0.49
SMARCD1-209ENST00000550477 SOX6P35712 828 aa18.12■□□□□ 0.49
SMARCD1-209ENST00000550477 Q8N6K4 173 aa18.12■□□□□ 0.49
SMARCD1-209ENST00000550477 OR52I1Q8NGK6 324 aa18.12■□□□□ 0.49
SMARCD1-209ENST00000550477 MRPS18AQ9NVS2 196 aaKnown RBP18.12■□□□□ 0.49
SMARCD1-209ENST00000550477 GNG12Q9UBI6 72 aa18.12■□□□□ 0.49
SMARCD1-209ENST00000550477 CKLFQ9UBR5 152 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms