RNA–Protein interactions for RNA: ENST00000549891.5

TROAP-211, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 932 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-211ENST00000549891 RASL11BQ9BPW5 248 aa10.66□□□□□ -0.7
TROAP-211ENST00000549891 ALG8Q9BVK2 526 aa10.66□□□□□ -0.7
TROAP-211ENST00000549891 DPCDQ9BVM2 203 aaPredicted RBP10.66□□□□□ -0.7
TROAP-211ENST00000549891 EXOGQ9Y2C4 368 aaKnown RBP10.66□□□□□ -0.7
TROAP-211ENST00000549891 A0A1W2PPE3 182 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 TMEM30CPA0ZSE6 113 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 SEC14L6B5MCN3 397 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 SDCBPO00560 298 aaPredicted RBP10.65□□□□□ -0.7
TROAP-211ENST00000549891 GABRPO00591 440 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 TXNL1O43396 289 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 HTR3BO95264 441 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 MOSP00540 346 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 CD1BP29016 333 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 REG1BP48304 166 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 DEFB136Q30KP8 78 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 PIGYQ3MUY2 71 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 LINC00596Q86U02 117 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 LHFPL3Q86UP9 236 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 Q8N6K4 173 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 Q8N9W7 124 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 SUMF2Q8NBJ7 301 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 Q8NFD4 153 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 C4orf3Q8WVX3 66 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 PRR25Q96S07 402 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 S100A13Q99584 98 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 IFT22Q9H7X7 185 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 PAK1IP1Q9NWT1 392 aaPredicted RBP10.65□□□□□ -0.7
TROAP-211ENST00000549891 ST3GAL6Q9Y274 331 aa10.65□□□□□ -0.7
TROAP-211ENST00000549891 SORL1Q92673 2214 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 IGHV3-72A0A0B4J1Y9 119 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 SAC3D1A6NKF1 404 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 OR7C1O76099 320 aaPredicted RBP10.64□□□□□ -0.71
TROAP-211ENST00000549891 FADS2O95864 444 aaKnown RBP10.64□□□□□ -0.71
TROAP-211ENST00000549891 CSTBP04080 98 aaKnown RBP10.64□□□□□ -0.71
TROAP-211ENST00000549891 CD2P06729 351 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 OR5H8P0DN80 308 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 INSL3P51460 131 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 GBX2P52951 348 aaPredicted RBP10.64□□□□□ -0.71
TROAP-211ENST00000549891 Q3ZCU0 254 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 NHLRC3Q5JS37 347 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 RTN4IP1Q8WWV3 396 aaPredicted RBP10.64□□□□□ -0.71
TROAP-211ENST00000549891 ARL11Q969Q4 196 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 LGALS12Q96DT0 336 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 S1PR3Q99500 378 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 PDCD1LG2Q9BQ51 273 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 CHCHD6Q9BRQ6 235 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 METTL9Q9H1A3 318 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 ISG20L2Q9H9L3 353 aaKnown RBP10.64□□□□□ -0.71
TROAP-211ENST00000549891 RAB9BQ9NP90 201 aa10.64□□□□□ -0.71
TROAP-211ENST00000549891 CHCHD3Q9NX63 227 aaKnown RBP10.64□□□□□ -0.71
TROAP-211ENST00000549891 ZNF256Q9Y2P7 627 aaPredicted RBP10.64□□□□□ -0.71
TROAP-211ENST00000549891 TRAV39A0A0B4J263 110 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 ORC5O43913 435 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 IGHG4P01861 327 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 ALPLP05186 524 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 CHATP28329 748 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 SOX6P35712 828 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 RBM11P57052 281 aaKnown RBP10.63□□□□□ -0.71
TROAP-211ENST00000549891 ZNF260Q3ZCT1 412 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 NKAPLQ5M9Q1 402 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 ZNF529Q6P280 563 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 ASCL4Q6XD76 172 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 TMEM104Q8NE00 496 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 OR10K1Q8NGX5 313 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 OR52N1Q8NH53 320 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 Q96MT0 163 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 PLSCR3Q9NRY6 295 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 GFOD1Q9NXC2 390 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 IL36GQ9NZH8 169 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 SCOCQ9UIL1 159 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 ZNF580Q9UK33 172 aa10.63□□□□□ -0.71
TROAP-211ENST00000549891 ZNF780AO75290 641 aaPredicted RBP10.62□□□□□ -0.71
TROAP-211ENST00000549891 IGF1P05019 195 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 FHL3Q13643 280 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 MPV17LQ2QL34 196 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 TMEM30BQ3MIR4 351 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 STX19Q8N4C7 294 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 FAM71E2Q8N5Q1 922 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 OR51A2Q8NGJ7 313 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 GPR148Q8TDV2 347 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 NEK7Q8TDX7 302 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 ST6GALNAC6Q969X2 333 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 JAM3Q9BX67 310 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 TMEM138Q9NPI0 162 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 ERVK13-1Q9NX77 482 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 TAS2R4Q9NYW5 299 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 ING4Q9UNL4 249 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 SMAD5-AS1Q9Y6J3 95 aa10.62□□□□□ -0.71
TROAP-211ENST00000549891 C15orf65H3BRN8 121 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 AIPO00170 330 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 SPINT2O43291 252 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 CIB2O75838 187 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 ATP5HO75947 161 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 CDRT1O95170 752 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 OR8U8P0C7N1 319 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 PSMB8P28062 276 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 ZNF93P35789 620 aaPredicted RBP10.61□□□□□ -0.71
TROAP-211ENST00000549891 SOX2P48431 317 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 PPP3R1P63098 170 aa10.61□□□□□ -0.71
TROAP-211ENST00000549891 CFHR3Q02985 330 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms