RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 TUBD1Q9UJT1 453 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 TRAPPC2LQ9UL33 140 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 OR2W1Q9Y3N9 320 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 AUP1Q9Y679 476 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 IGLV3-9A0A075B6K5 115 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 C3orf85A0A1B0GTC6 90 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 hCG_1807616A0A1W2PRN6 198 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 TUBAL3A6NHL2 446 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 C16orf97H3BN30 126 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 CD40P25942 277 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 VHLLQ6RSH7 139 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 LGI3Q8N145 548 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 LHFPL5Q8TAF8 219 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 SCARB1Q8WTV0 552 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 IGF2RP11717 2491 aa17.63■□□□□ 0.41
RITA1-201ENST00000548278 ARID1AO14497 2285 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 SPDEFO95238 335 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 UBA52P62987 128 aaKnown RBP17.62■□□□□ 0.41
RITA1-201ENST00000548278 LYZL2Q7Z4W2 148 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 TBC1D26Q86UD7 250 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 USB1Q9BQ65 265 aaKnown RBP17.62■□□□□ 0.41
RITA1-201ENST00000548278 CCL28Q9NRJ3 127 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 LEUTXA8MZ59 168 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 SMIM21Q3B7S5 101 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 LRRC29Q8WV35 223 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 ST8SIA2Q92186 375 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 OR1A1Q9P1Q5 309 aa17.62■□□□□ 0.41
RITA1-201ENST00000548278 SPTBN4Q9H254 2564 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 HSD17B6O14756 317 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 PET100P0DJ07 73 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 RPS23P62266 143 aaKnown RBP17.61■□□□□ 0.41
RITA1-201ENST00000548278 HMGN3Q15651 99 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 OR1S1Q8NH92 325 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 IL1F10Q8WWZ1 152 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 CNTNAP3BQ96NU0 1288 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 CITED4Q96RK1 184 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 CNTNAP3Q9BZ76 1288 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 TMEM222Q9H0R3 208 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 PCNX1Q96RV3 2341 aa17.61■□□□□ 0.41
RITA1-201ENST00000548278 RLN2P04090 185 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 S100A10P60903 97 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 THOC7Q6I9Y2 204 aaKnown RBP17.6■□□□□ 0.41
RITA1-201ENST00000548278 KIF25Q9UIL4 384 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 PLCE1Q9P212 2302 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 TMEM30CPA0ZSE6 113 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 IFNL4K9M1U5 179 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 TFF1P04155 84 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 CFHR2P36980 270 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 RBPJQ06330 500 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 SPRNQ5BIV9 151 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 OR10Z1Q8NGY1 313 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 TAF9BQ9HBM6 251 aa17.6■□□□□ 0.41
RITA1-201ENST00000548278 ERRFI1Q9UJM3 462 aaPredicted RBP17.6■□□□□ 0.41
RITA1-201ENST00000548278 FBXO9Q9UK97 447 aaPredicted RBP17.6■□□□□ 0.41
RITA1-201ENST00000548278 KIAA2026Q5HYC2 2103 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 MSGN1A6NI15 193 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 LUMP51884 338 aaPredicted RBP17.59■□□□□ 0.41
RITA1-201ENST00000548278 SRPXP78539 464 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 TESK1Q15569 626 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 SLC35E4Q6ICL7 350 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 MEGF10Q96KG7 1140 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 TMEM56Q96MV1 263 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 AQP10Q96PS8 301 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 OR2V2Q96R30 315 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 GPHA2Q96T91 129 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 ARPC5LQ9BPX5 153 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 MRPL37Q9BZE1 423 aaKnown RBP17.59■□□□□ 0.41
RITA1-201ENST00000548278 DNAJB11Q9UBS4 358 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 METRNQ9UJH8 293 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 TMEM56-RWDD3S4R434 201 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 SRRM5B3KS81 715 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.59■□□□□ 0.41
RITA1-201ENST00000548278 NMBP08949 121 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 EGR1P18146 543 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 OR3A1P47881 315 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 MEX3BQ6ZN04 569 aaKnown RBP17.59■□□□□ 0.41
RITA1-201ENST00000548278 CMTM1Q8IZ96 169 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 PRR18Q8N4B5 295 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 COQ2Q96H96 371 aa17.59■□□□□ 0.41
RITA1-201ENST00000548278 ZNF471Q9BX82 626 aaPredicted RBP17.59■□□□□ 0.41
RITA1-201ENST00000548278 COL10A1Q03692 680 aa17.58■□□□□ 0.4
RITA1-201ENST00000548278 CD177Q8N6Q3 437 aa17.58■□□□□ 0.4
RITA1-201ENST00000548278 SLC35G3Q8N808 338 aa17.58■□□□□ 0.4
RITA1-201ENST00000548278 BVESQ8NE79 360 aa17.58■□□□□ 0.4
RITA1-201ENST00000548278 NUP37Q8NFH4 326 aa17.58■□□□□ 0.4
RITA1-201ENST00000548278 UBALD1Q8TB05 177 aa17.58■□□□□ 0.4
RITA1-201ENST00000548278 UBE2J1Q9Y385 318 aaPredicted RBP17.58■□□□□ 0.4
RITA1-201ENST00000548278 TMED3Q9Y3Q3 217 aa17.58■□□□□ 0.4
RITA1-201ENST00000548278 F5H0A9 414 aaPredicted RBP17.57■□□□□ 0.4
RITA1-201ENST00000548278 SPRY3O43610 288 aa17.57■□□□□ 0.4
RITA1-201ENST00000548278 PGLYRP1O75594 196 aaPredicted RBP17.57■□□□□ 0.4
RITA1-201ENST00000548278 HEXAP06865 529 aa17.57■□□□□ 0.4
RITA1-201ENST00000548278 THBDP07204 575 aa17.57■□□□□ 0.4
RITA1-201ENST00000548278 AESQ08117 197 aa17.57■□□□□ 0.4
RITA1-201ENST00000548278 ESCO2Q56NI9 601 aa17.57■□□□□ 0.4
RITA1-201ENST00000548278 TMEM268Q5VZI3 342 aa17.57■□□□□ 0.4
RITA1-201ENST00000548278 TMEM108Q6UXF1 575 aa17.57■□□□□ 0.4
RITA1-201ENST00000548278 FOXRED2Q8IWF2 684 aa17.57■□□□□ 0.4
RITA1-201ENST00000548278 OR10V1Q8NGI7 309 aa17.57■□□□□ 0.4
RITA1-201ENST00000548278 DEDDO75618 318 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms