RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 SETD2Q9BYW2 2564 aaPredicted RBP14.43□□□□□ -0.1
HDAC7-227ENST00000548080 TRBV6-6A0A0A6YYG2 114 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 POM121CA8CG34 1229 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 GYPAP02724 150 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 OR3A3P47888 321 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 LCN2P80188 198 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 SRSF7Q16629 238 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC7-227ENST00000548080 TMEM155Q4W5P6 130 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 RSBN1Q5VWQ0 802 aaPredicted RBP14.43□□□□□ -0.1
HDAC7-227ENST00000548080 TEX36Q5VZQ5 186 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 Q6ZS49 121 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 BTN2A1Q7KYR7 527 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 SPICQ8N5J4 248 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 LINC01356Q8N9X3 169 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 OR5AP2Q8NGF4 316 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 CREB3L1Q96BA8 519 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 RAB39BQ96DA2 213 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 SLC6A7Q99884 636 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 MARVELD1Q9BSK0 173 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 PATZ1Q9HBE1 687 aaKnown RBP14.43□□□□□ -0.1
HDAC7-227ENST00000548080 ZNF286AQ9HBT8 521 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 Q9N2K0 584 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 ANXA10Q9UJ72 324 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 SCP2D1Q9UJQ7 156 aa14.43□□□□□ -0.1
HDAC7-227ENST00000548080 IGKV1D-8A0A087WSZ0 117 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 TMEM82A0PJX8 343 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 LGALS8O00214 317 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 PSPNO60542 156 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 IFNA6P05013 189 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 CSN2P05814 226 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 RPS2P15880 293 aaKnown RBP14.42□□□□□ -0.1
HDAC7-227ENST00000548080 MUC1P15941 1255 aaPredicted RBP14.42□□□□□ -0.1
HDAC7-227ENST00000548080 GABRA2P47869 451 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 KCNJ3P48549 501 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 ZNF497Q6ZNH5 498 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 IL17RELQ6ZVW7 336 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 MUC20Q8N307 709 aaPredicted RBP14.42□□□□□ -0.1
HDAC7-227ENST00000548080 ANGPTL6Q8NI99 470 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 PLPPR1Q8TBJ4 325 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 MRPL30Q8TCC3 161 aaKnown RBP14.42□□□□□ -0.1
HDAC7-227ENST00000548080 UPRTQ96BW1 309 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 METRNQ9UJH8 293 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 ZNF222Q9UK12 451 aa14.42□□□□□ -0.1
HDAC7-227ENST00000548080 ANK3Q12955 4377 aaKnown RBP14.41□□□□□ -0.1
HDAC7-227ENST00000548080 A0A1B0GW55 424 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 OOEPA6NGQ2 149 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 INMT-MINDY4F8WBC2 141 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 PHF1O43189 567 aaPredicted RBP14.41□□□□□ -0.1
HDAC7-227ENST00000548080 NDUFB6O95139 128 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 DUX4L2P0CJ85 424 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 DUX4L3P0CJ86 424 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 DUX4L4P0CJ87 422 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 DUX4L5P0CJ88 424 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 DUX4L6P0CJ89 424 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 DUX4L7P0CJ90 424 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 ZFP36P26651 326 aaKnown RBP14.41□□□□□ -0.1
HDAC7-227ENST00000548080 OR3A1P47881 315 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 ARPC4P59998 168 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 ATXN7L3Q14CW9 347 aaPredicted RBP14.41□□□□□ -0.1
HDAC7-227ENST00000548080 CDK10Q15131 360 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 ZNF880Q6PDB4 577 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 DUX4L9Q6RFH8 374 aaPredicted RBP14.41□□□□□ -0.1
HDAC7-227ENST00000548080 Q6ZPA2 131 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 C17orf107Q6ZR85 190 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 GAPTQ8N292 157 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 C1orf159Q96HA4 380 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 SNX22Q96L94 193 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 PRRT1Q99946 306 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 NUDT15Q9NV35 164 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 SLC2A8Q9NY64 477 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 DUX4Q9UBX2 424 aa14.41□□□□□ -0.1
HDAC7-227ENST00000548080 WNK2Q9Y3S1 2297 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 A8MV72 311 aaPredicted RBP14.4□□□□□ -0.1
HDAC7-227ENST00000548080 B4DSR2 109 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 F5H0A9 414 aaPredicted RBP14.4□□□□□ -0.1
HDAC7-227ENST00000548080 MSMBP08118 114 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 H2AFB2P0C5Z0 115 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 RBMS2Q15434 407 aaKnown RBP14.4□□□□□ -0.1
HDAC7-227ENST00000548080 GRK1Q15835 563 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 STUMQ69YW2 141 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 OVCH2Q7RTZ1 564 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 ARRDC1Q8N5I2 433 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 ASCC1Q8N9N2 400 aaKnown RBP14.4□□□□□ -0.1
HDAC7-227ENST00000548080 PPP1R35Q8TAP8 253 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 GINS4Q9BRT9 223 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 ING3Q9NXR8 418 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 EHFQ9NZC4 300 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 CTSZQ9UBR2 303 aa14.4□□□□□ -0.1
HDAC7-227ENST00000548080 SVEP1Q4LDE5 3571 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 TRAV6A0A075B6T7 132 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 TRAV38-1A0A0B4J264 116 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 KIR2DS1A0A191URI9 304 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 TMEM30CPA0ZSE6 113 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 ADAM20O43506 726 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 ZNF737O75373 536 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 WNT2P09544 360 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 KIR2DS4P43632 304 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 KIR2DS1Q14954 304 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 SCGB2B2Q4G0G5 96 aa14.39□□□□□ -0.11
HDAC7-227ENST00000548080 SLC35E4Q6ICL7 350 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms