RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 PEAK1Q9H792 1746 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 IQGAP1P46940 1657 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 DNMT1P26358 1616 aaKnown RBP0.6□□□□□ -2.31
CEP290-204ENST00000547926 ADGRB1O14514 1584 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 TIAM1Q13009 1591 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP0.6□□□□□ -2.31
CEP290-204ENST00000547926 NUP153P49790 1475 aaKnown RBP0.6□□□□□ -2.31
CEP290-204ENST00000547926 ERBINQ96RT1 1412 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 NSD2O96028 1365 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 CR1P17927 2039 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 PHLPP2Q6ZVD8 1323 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 FAM240AA0A1B0GVK7 77 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 RNF113AO15541 343 aaKnown RBP0.6□□□□□ -2.31
CEP290-204ENST00000547926 OPN1SWP03999 348 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 ARL14EPLP0DKL9 152 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 MLNP12872 115 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 ZNF140P52738 457 aaPredicted RBP0.6□□□□□ -2.31
CEP290-204ENST00000547926 OR8K1Q8NGG5 319 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 OR5C1Q8NGR4 320 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 OR4K13Q8NH42 304 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 PIH1D2Q8WWB5 315 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 TXNDC17Q9BRA2 123 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 CHRNA10Q9GZZ6 450 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 OR2AG1Q9H205 316 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 NAGKQ9UJ70 344 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 CACNA1SQ13698 1873 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 PKD1L3Q7Z443 1732 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 PRDM15P57071 1507 aaPredicted RBP0.6□□□□□ -2.31
CEP290-204ENST00000547926 SOGA1O94964 1423 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 NPATQ14207 1427 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 MUC12Q9UKN1 5478 aa0.6□□□□□ -2.31
CEP290-204ENST00000547926 ADAMTSL1Q8N6G6 1762 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 TRPM3Q9HCF6 1732 aaPredicted RBP0.59□□□□□ -2.31
CEP290-204ENST00000547926 LOC100653049A0A140TA62 436 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 ZNF701M0R085 212 aaPredicted RBP0.59□□□□□ -2.31
CEP290-204ENST00000547926 KRT34O76011 436 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 S1PR2O95136 353 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 HLA-AP01891 365 aaKnown RBP0.59□□□□□ -2.31
CEP290-204ENST00000547926 TUBG1P23258 451 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 CALRP27797 417 aaKnown RBP0.59□□□□□ -2.31
CEP290-204ENST00000547926 ST3GAL4Q11206 333 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 IL18Q14116 193 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 HES1Q14469 280 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 TTMPQ5BVD1 217 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 CLEC2AQ6UVW9 174 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 SCXQ7RTU7 201 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 DPPA2Q7Z7J5 298 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 SETD3Q86TU7 594 aaPredicted RBP0.59□□□□□ -2.31
CEP290-204ENST00000547926 NDNFQ8TB73 568 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 ZFAND1Q8TCF1 268 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 TFGQ92734 400 aaPredicted RBP0.59□□□□□ -2.31
CEP290-204ENST00000547926 TSSK6Q9BXA6 273 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 ZNF436Q9C0F3 470 aaPredicted RBP0.59□□□□□ -2.31
CEP290-204ENST00000547926 TUBG2Q9NRH3 451 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 RBM12B-AS1Q9P1G2 102 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 RABL2BQ9UNT1 228 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 CCL26Q9Y258 94 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 HSPE1-MOB4S4R3N1 261 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 PEG3Q9GZU2 1588 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 ABCC1P33527 1531 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 ZFYVE16Q7Z3T8 1539 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 ABCA4P78363 2273 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 PZPP20742 1482 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 PLCH2O75038 1416 aa0.59□□□□□ -2.31
CEP290-204ENST00000547926 SBNO1A3KN83 1393 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 SUPT3HB4E1H0 165 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 CRTAPO75718 401 aaPredicted RBP0.59□□□□□ -2.32
CEP290-204ENST00000547926 TRAPPC6AO75865 159 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 GTF2F2P13984 249 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 PTMSP20962 102 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 LCN2P80188 198 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 FAM27D1Q5T7N8 215 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 MARCH3Q86UD3 253 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 NT5CQ8TCD5 201 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 C22orf15Q8WYQ4 148 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 YPEL4Q96NS1 127 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 OR2D2Q9H210 308 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 ARMC7Q9H6L4 198 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 CHTOPQ9Y3Y2 248 aaKnown RBP0.59□□□□□ -2.32
CEP290-204ENST00000547926 ASXL1Q8IXJ9 1541 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 NUP160Q12769 1436 aa0.59□□□□□ -2.32
CEP290-204ENST00000547926 KIF14Q15058 1648 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 MDC1Q14676 2089 aaKnown RBP0.58□□□□□ -2.32
CEP290-204ENST00000547926 C17orf98A8MV24 154 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 GYG2O15488 501 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 SLC37A4O43826 429 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 RLN2P04090 185 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 TAC1P20366 129 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 S100A2P29034 98 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 CASP8Q14790 479 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 TNXAQ16473 311 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 CST9Q5W186 159 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 MRPL21Q7Z2W9 205 aaKnown RBP0.58□□□□□ -2.32
CEP290-204ENST00000547926 OR2W3Q7Z3T1 314 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 COMMD1Q8N668 190 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 OR2M3Q8NG83 312 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 MFSD8Q8NHS3 518 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 TCP10LQ8TDR4 215 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 PYURFQ96I23 114 aa0.58□□□□□ -2.32
CEP290-204ENST00000547926 QKIQ96PU8 341 aaKnown RBP eCLIP0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms