RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 SCCPDHQ8NBX0 429 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 SH3BGRL3Q9H299 93 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 CDH20Q9HBT6 801 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 LUZP4Q9P127 313 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 FAM24AA6NFZ4 105 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 ATP6V1G2-DDX39BF2Z307 99 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 NPBWR1P48145 328 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 ERVS71-1P61550 626 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 CXorf66Q5JRM2 361 aaPredicted RBP13.19□□□□□ -0.3
BRF1-212ENST00000547562 DHRS7BQ6IAN0 325 aaPredicted RBP13.19□□□□□ -0.3
BRF1-212ENST00000547562 Q8IYB0 196 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 IL22RA2Q969J5 263 aa13.19□□□□□ -0.3
BRF1-212ENST00000547562 IGSF23A1L1A6 192 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 FAM157AC9JC47 383 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 SSSCA1O60232 199 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 LYZL6O75951 148 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 TSPAN15O95858 294 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 F2RP25116 425 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 S100GP29377 79 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 MDH2P40926 338 aaKnown RBP13.18□□□□□ -0.3
BRF1-212ENST00000547562 CCL11P51671 97 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 ERVK11-1P61568 191 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 MIDNQ504T8 468 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 CBLN2Q8IUK8 224 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 HSD17B11Q8NBQ5 300 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 FDCSPQ8NFU4 85 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 LYRM2Q9NU23 88 aaPredicted RBP13.18□□□□□ -0.3
BRF1-212ENST00000547562 TREM2Q9NZC2 230 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 POLDIP2Q9Y2S7 368 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 TTC28Q96AY4 2481 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 C9JQL5 133 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 NPIPB11E5RHQ5 1161 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 H2AFB1P0C5Y9 115 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 RAB5CP51148 216 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 ZNF616Q08AN1 781 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 SRSF6Q13247 344 aaKnown RBP13.18□□□□□ -0.3
BRF1-212ENST00000547562 FAM214BQ7L5A3 538 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 MAGT1Q9H0U3 335 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 PLEKHF2Q9H8W4 249 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 CACFD1Q9UGQ2 172 aa13.18□□□□□ -0.3
BRF1-212ENST00000547562 ERRFI1Q9UJM3 462 aaPredicted RBP13.18□□□□□ -0.3
BRF1-212ENST00000547562 LOC400499M0QZD8 3231 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 SLC33A1O00400 549 aaPredicted RBP13.17□□□□□ -0.3
BRF1-212ENST00000547562 OR2H2O95918 312 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 RAC2P15153 192 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 SNCAP37840 140 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 CAMLGP49069 296 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 ASCL1P50553 236 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 ID3Q02535 119 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 Q6ZT83 130 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 MOB1BQ7L9L4 216 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 COMMD1Q8N668 190 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 PLPPR1Q8TBJ4 325 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 SLC25A40Q8TBP6 338 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 IL1F10Q8WWZ1 152 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 TRIB1Q96RU8 372 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 STRAPQ9Y3F4 350 aaKnown RBP13.17□□□□□ -0.3
BRF1-212ENST00000547562 CACNA1GO43497 2377 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 OTOGLQ3ZCN5 2332 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 SIRPB1O00241 398 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 PITX3O75364 302 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 TSPAN9O75954 239 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 FHITP49789 147 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 UCP2P55851 309 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 VAMP2P63027 116 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 ZNF154Q13106 437 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 ZNF266Q14584 549 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 GUSBP1Q15486 140 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 GABRA6Q16445 453 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 ALKBH6Q3KRA9 238 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 ZNF497Q6ZNH5 498 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 TMEM252Q8N6L7 170 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 SLC25A31Q9H0C2 315 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 C19orf12Q9NSK7 152 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 OR1A1Q9P1Q5 309 aa13.17□□□□□ -0.3
BRF1-212ENST00000547562 CDIPTO14735 213 aa13.16□□□□□ -0.3
BRF1-212ENST00000547562 C1QL1O75973 258 aa13.16□□□□□ -0.3
BRF1-212ENST00000547562 FTH1P19P0C7X4 201 aa13.16□□□□□ -0.3
BRF1-212ENST00000547562 PGA5P0DJD9 388 aa13.16□□□□□ -0.3
BRF1-212ENST00000547562 CLINT1Q14677 625 aa13.16□□□□□ -0.3
BRF1-212ENST00000547562 INO80CQ6PI98 192 aaPredicted RBP13.16□□□□□ -0.3
BRF1-212ENST00000547562 DEFB124Q8NES8 71 aa13.16□□□□□ -0.3
BRF1-212ENST00000547562 OR10V1Q8NGI7 309 aa13.16□□□□□ -0.3
BRF1-212ENST00000547562 NDRG3Q9UGV2 375 aa13.16□□□□□ -0.3
BRF1-212ENST00000547562 TRAV39A0A0B4J263 110 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 IQCF6A8MYZ5 107 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 PROB1E7EW31 1015 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 PRH1P02810 166 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 MMP9P14780 707 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 GTF3C1Q12789 2109 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 PSG7Q13046 419 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 SHEQ5VZ18 495 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 OR1J1Q8NGS3 322 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 OR51H1Q8NH63 302 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 KIAA2026Q5HYC2 2103 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.15□□□□□ -0.3
BRF1-212ENST00000547562 NXPH2O95156 264 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 TMEM50AO95807 157 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 WNT2P09544 360 aa13.15□□□□□ -0.3
BRF1-212ENST00000547562 OMGP23515 440 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms