RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 RPS11P62280 158 aaKnown RBP eCLIP6.18□□□□□ -1.42
SNHG1-223ENST00000545440 AESQ08117 197 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 ST3GAL4Q11206 333 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 DYNC1I2Q13409 638 aaKnown RBP6.18□□□□□ -1.42
SNHG1-223ENST00000545440 RIPK1Q13546 671 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 ATXN7L3Q14CW9 347 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-223ENST00000545440 RSU1Q15404 277 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 FAM189A2Q15884 450 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 SSX2Q16385 188 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 LY6EQ16553 131 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 Q499Y3 187 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 PAN3Q58A45 887 aaKnown RBP6.18□□□□□ -1.42
SNHG1-223ENST00000545440 NHLRC3Q5JS37 347 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 KRBOX4Q5JUW0 171 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 FAM209BQ5JX69 171 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 LDLRAD2Q5SZI1 272 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 PRAMEF5Q5TYX0 476 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 SLC35E4Q6ICL7 350 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 AHSA2Q719I0 299 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 LINC00596Q86U02 117 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 DYNAPQ8N1N2 210 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 OR4P4Q8NGL7 312 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 OR2T6Q8NHC8 308 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 ZNF596Q8TC21 504 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 PIFOQ8TCI5 191 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 THRSPQ92748 146 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 GGHQ92820 318 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 GHSRQ92847 366 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 C8orf49Q96NF6 230 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 MMP27Q9H306 513 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 NCOR1P1Q9H4R4 102 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 DCLRE1BQ9H816 532 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 ABCB10Q9NRK6 738 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 PLCXD1Q9NUJ7 323 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 PAK1IP1Q9NWT1 392 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-223ENST00000545440 CKLFQ9UBR5 152 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 CLEC2DQ9UHP7 191 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 PITPNC1Q9UKF7 332 aa6.18□□□□□ -1.42
SNHG1-223ENST00000545440 SIRT4Q9Y6E7 314 aaPredicted RBP6.18□□□□□ -1.42
SNHG1-223ENST00000545440 A0A087WWL8 130 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 TRAV24A0A0B4J272 114 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 XPNPEP2O43895 674 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 ZNF780AO75290 641 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-223ENST00000545440 GPX5O75715 221 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 MMP23AO75900 390 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 IGLV1-47P01700 117 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 CDK2P24941 298 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 HTR1DP28221 377 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 ARHGDIBP52566 201 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 WNT4P56705 351 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 RBM11P57052 281 aaKnown RBP6.17□□□□□ -1.42
SNHG1-223ENST00000545440 RPS16P62249 146 aaKnown RBP6.17□□□□□ -1.42
SNHG1-223ENST00000545440 BDH1Q02338 343 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 SCN1BQ07699 218 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 C2orf68Q2NKX9 166 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 MPV17LQ2QL34 196 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 PIGYQ3MUY2 71 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 PLA1AQ53H76 456 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 FBLN7Q53RD9 439 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 LAIR2Q6ISS4 152 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 SATL1Q86VE3 508 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 Q8N2B8 174 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 NKAIN3Q8N8D7 197 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 OR4D6Q8NGJ1 314 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 OR13C5Q8NGS8 318 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 NDNFQ8TB73 568 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 CREB3L1Q96BA8 519 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 ZNF184Q99676 751 aaPredicted RBP6.17□□□□□ -1.42
SNHG1-223ENST00000545440 PPIL3Q9H2H8 161 aaKnown RBP6.17□□□□□ -1.42
SNHG1-223ENST00000545440 LINC00574Q9H8X3 128 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 FKBP14Q9NWM8 211 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 PSORS1C1Q9UIG5 152 aa6.17□□□□□ -1.42
SNHG1-223ENST00000545440 TRAV8-7A0A075B6U6 113 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 TRBV5-7A0A0A0MS05 114 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 KBTBD11-OT1A0A1B0GTJ5 212 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 LOC102723971A0A1B0GUV8 181 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 MAGEA13PA6NCF6 341 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 A6NDX4 124 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 PRSS29PA6NIE9 313 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 FAM90A22PA8MWA6 464 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 LEUTXA8MZ59 168 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 OOSP1A8MZH6 123 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 F5H697 171 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 HSPB6O14558 160 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 CDRT1O95170 752 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 IL1AP01583 271 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 CSTBP04080 98 aaKnown RBP6.16□□□□□ -1.42
SNHG1-223ENST00000545440 SERPINA2P20848 420 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 MAPK3P27361 379 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-223ENST00000545440 C21orf33P30042 268 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-223ENST00000545440 CEACAM3P40198 252 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 GLP1RP43220 463 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 LOXL3P58215 753 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 SLC34A1Q06495 639 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 GPR176Q14439 515 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 HERPUD1Q15011 391 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 C17orf58Q2M2W7 97 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 HLA-DRB5Q30154 266 aa6.16□□□□□ -1.42
SNHG1-223ENST00000545440 RSBN1Q5VWQ0 802 aaPredicted RBP6.16□□□□□ -1.42
SNHG1-223ENST00000545440 RNLSQ5VYX0 342 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms