RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 OR9G1Q8NH87 305 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 MRGPRDQ8TDS7 321 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 CYYR1Q96J86 154 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 BANF2Q9H503 90 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 RAB18Q9NP72 206 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 IDI2-AS1Q9NZ38 188 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 BLOC1S6Q9UL45 172 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 HILPDAQ9Y5L2 63 aa9.19□□□□□ -0.94
YBX3-216ENST00000544622 TRAV39A0A0B4J263 110 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 FAM172BPA6NC97 362 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 TMEM14DPA8MWL7 114 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 LEUTXA8MZ59 168 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 J3QR06 171 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 ORC5O43913 435 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 CA11O75493 328 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 CRTAPO75718 401 aaPredicted RBP9.18□□□□□ -0.94
YBX3-216ENST00000544622 UBBP0CG47 229 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 GABRA5P31644 462 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 SSTR5P35346 364 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 GLP1RP43220 463 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 LOXL3P58215 753 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 GABARAPL2P60520 117 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 UNC119Q13432 240 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 RBM39Q14498 530 aaKnown RBP9.18□□□□□ -0.94
YBX3-216ENST00000544622 ATAD3CQ5T2N8 411 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 Q8N2B8 174 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 OR52M1Q8NGK5 317 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 RFESDQ8TAC1 157 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 CREB3L1Q96BA8 519 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 TM2D1Q9BX74 207 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 YTHDF1Q9BYJ9 559 aaKnown RBP9.18□□□□□ -0.94
YBX3-216ENST00000544622 SELENOIQ9C0D9 397 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 MMP28Q9H239 520 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 RANBP3Q9H6Z4 567 aaPredicted RBP9.18□□□□□ -0.94
YBX3-216ENST00000544622 PSG11Q9UQ72 335 aa9.18□□□□□ -0.94
YBX3-216ENST00000544622 TMEM30CPA0ZSE6 113 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 FAM90A9PA6NNJ1 464 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 MCRIP1C9JLW8 97 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 F2RL2O00254 374 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 ARL6IP5O75915 188 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 FUT3P21217 361 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 HTR2CP28335 458 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 EFNB2P52799 333 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 PRRX1P54821 245 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 RPS27AP62979 156 aaKnown RBP9.17□□□□□ -0.94
YBX3-216ENST00000544622 PLA1AQ53H76 456 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 TPTE2P1Q5T6R2 138 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 SYT6Q5T7P8 510 aaPredicted RBP9.17□□□□□ -0.94
YBX3-216ENST00000544622 UBE2UQ5VVX9 321 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 OR10K2Q6IF99 312 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 RAB12Q6IQ22 244 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 ZNF367Q7RTV3 350 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 SPARTQ8N0X7 666 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 NDNFQ8TB73 568 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 CST11Q9H112 138 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 MBNL3Q9NUK0 354 aaKnown RBP9.17□□□□□ -0.94
YBX3-216ENST00000544622 NDUFB11Q9NX14 153 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 PITPNC1Q9UKF7 332 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 PEX16Q9Y5Y5 336 aa9.17□□□□□ -0.94
YBX3-216ENST00000544622 SHISA3A0PJX4 238 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 OOSP1A8MZH6 123 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 C12orf77C9JDV5 145 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 H3BUI4 141 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 SLC17A2O00624 439 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 TOR1AO14656 332 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 PDCD6O75340 191 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 BPNT1O95861 308 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 GALP22466 123 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 NFYBP25208 207 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 CHATP28329 748 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 Q3ZCU0 254 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 FBLN7Q53RD9 439 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 FAM89BQ8N5H3 189 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 LINC00311Q8N616 119 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 C8orf31Q8N9H6 132 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 OR6M1Q8NGM8 313 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 KCNG3Q8TAE7 436 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 LEAP2Q969E1 77 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 FAM46BQ96A09 425 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 ZNF702PQ9H963 129 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 ABCB10Q9NRK6 738 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 ETAA1Q9NY74 926 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 RRP15Q9Y3B9 282 aaKnown RBP9.16□□□□□ -0.94
YBX3-216ENST00000544622 AK6Q9Y3D8 172 aaKnown RBP9.16□□□□□ -0.94
YBX3-216ENST00000544622 LRRC42Q9Y546 428 aa9.16□□□□□ -0.94
YBX3-216ENST00000544622 MEGF8Q7Z7M0 2845 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 A0A0A6YYD4 124 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 FOXI3A8MTJ6 420 aaPredicted RBP9.15□□□□□ -0.94
YBX3-216ENST00000544622 AIPO00170 330 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 LDLRAD4O15165 306 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 MPIG6BO95866 241 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 RCC1P18754 421 aaPredicted RBP9.15□□□□□ -0.94
YBX3-216ENST00000544622 CALRP27797 417 aaKnown RBP9.15□□□□□ -0.94
YBX3-216ENST00000544622 CEACAM3P40198 252 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 ZNF134P52741 427 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 BLCAPP62952 87 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 DIAPH2-AS1Q14236 149 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 FAM53AQ6NSI3 398 aaPredicted RBP9.15□□□□□ -0.94
YBX3-216ENST00000544622 C11orf88Q6PI97 169 aa9.15□□□□□ -0.94
YBX3-216ENST00000544622 Q6ZS46 218 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms