RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 GADD45AP24522 165 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 SCAND1P57086 179 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 OR10A3P58181 314 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 PRB3Q04118 309 aaPredicted RBP14.54□□□□□ -0.08
TSFM-208ENST00000543727 C2orf76Q3KRA6 126 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 PRAMEF5Q5TYX0 476 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 OR56B1Q8NGI3 324 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 OR52M1Q8NGK5 317 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 MRGPRDQ8TDS7 321 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 KIRREL1Q96J84 757 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 MDFIQ99750 246 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 RIMS4Q9H426 269 aaPredicted RBP14.54□□□□□ -0.08
TSFM-208ENST00000543727 LIN7BQ9HAP6 207 aa14.54□□□□□ -0.08
TSFM-208ENST00000543727 SOX21Q9Y651 276 aaPredicted RBP14.54□□□□□ -0.08
TSFM-208ENST00000543727 COL6A5A8TX70 2615 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 BLVRBP30043 206 aaPredicted RBP14.53□□□□□ -0.08
TSFM-208ENST00000543727 Q3ZCU0 254 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 HES5Q5TA89 166 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 C16orf87Q6PH81 154 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 ABHD12Q8N2K0 398 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 SPATA3Q8NHX4 192 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 DYRK2Q92630 601 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 YIPF6Q96EC8 236 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 MBNL3Q9NUK0 354 aaKnown RBP14.53□□□□□ -0.08
TSFM-208ENST00000543727 IDI2-AS1Q9NZ38 188 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 TRAPPC2LQ9UL33 140 aa14.53□□□□□ -0.08
TSFM-208ENST00000543727 LOC100506127A0A0U1RQW1 187 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 A0A1W2PRD5 423 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 A0A1W2PRF3 423 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 A0A1W2PRM7 423 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 VGLL3A8MV65 326 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 MMP23AO75900 390 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 CEACAM3P40198 252 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 PRRX1P54821 245 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 CLDN12P56749 244 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 DYNC1I2Q13409 638 aaKnown RBP14.52□□□□□ -0.09
TSFM-208ENST00000543727 LRRC75BQ2VPJ9 315 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 NKAPLQ5M9Q1 402 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 MOB1BQ7L9L4 216 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 CROCCP3Q8IVE0 287 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 OR9G1Q8NH87 305 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 NICN1Q9BSH3 213 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 KCNK15Q9H427 330 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 PLEKHJ1Q9NW61 149 aa14.52□□□□□ -0.09
TSFM-208ENST00000543727 AMMECR1Q9Y4X0 333 aaPredicted RBP14.52□□□□□ -0.09
TSFM-208ENST00000543727 TMEM272A0A1B0GTI8 110 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 METTL21EPA6NDL7 271 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 C15orf65H3BRN8 121 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 SPINT2O43291 252 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 AIREO43918 545 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 SCGNO76038 276 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 IGLV1-47P01700 117 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 OMGP23515 440 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 HTR1DP28221 377 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 SDC2P34741 201 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 SSTR5P35346 364 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 ARHGDIBP52566 201 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 ACTG1P63261 375 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 SRSF2Q01130 221 aaKnown RBP14.51□□□□□ -0.09
TSFM-208ENST00000543727 SFXN4Q6P4A7 337 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 BRICD5Q6PL45 260 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 LIAT1Q6ZQX7 453 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 C6orf201Q7Z4U5 140 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 NR2C2APQ86WQ0 139 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.51□□□□□ -0.09
TSFM-208ENST00000543727 C8orf31Q8N9H6 132 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 AJUBAQ96IF1 538 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 MRPS26Q9BYN8 205 aaKnown RBP14.51□□□□□ -0.09
TSFM-208ENST00000543727 KCNIP1Q9NZI2 227 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 VPREB3Q9UKI3 123 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 MGAT4AQ9UM21 535 aa14.51□□□□□ -0.09
TSFM-208ENST00000543727 A0A0A6YYD4 124 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 TRBV6-6A0A0A6YYG2 114 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 UBE2QL1A1L167 161 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 FOXI3A8MTJ6 420 aaPredicted RBP14.5□□□□□ -0.09
TSFM-208ENST00000543727 OOSP1A8MZH6 123 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 F2RL2O00254 374 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 TOR1AO14656 332 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 DYNLT3P51808 116 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 ARL6IP1Q15041 203 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 HLA-DRB5Q30154 266 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 OR4P4Q8NGL7 312 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 OR13F1Q8NGS4 319 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 ARL11Q969Q4 196 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 SULT4A1Q9BR01 284 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 CENPOQ9BU64 300 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 DPM3Q9P2X0 92 aa14.5□□□□□ -0.09
TSFM-208ENST00000543727 TMEM89A2RUT3 159 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 LEUTXA8MZ59 168 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 NAPSAO96009 420 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 IGHV4-59P01825 116 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 SMIM18P0DKX4 95 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 HKR1P10072 659 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 NFYBP25208 207 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 GDNFP39905 211 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 COMPP49747 757 aaPredicted RBP14.49□□□□□ -0.09
TSFM-208ENST00000543727 VEGFCP49767 419 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 CCDC144NLQ6NUI1 221 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 NDNFQ8TB73 568 aa14.49□□□□□ -0.09
TSFM-208ENST00000543727 MRPL30Q8TCC3 161 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms